Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CDC20B	Gene	0	0.27	0.24	0.05	2.31	0.71	2.70	0.07
2	331730	Transcript	0	0.00	0.00	0.00	0.00	0.00	1.15	0.00
3	296733	Transcript	0	0	0	0	0	0	0	0
4	381375	Transcript	0	0	0	0	0	0	0	0
5	334206	Transcript	0	0.79	0.00	0.26	0.00	4.74	0.00	0.00
6	322374	Transcript	0	0.00	0.00	0.00	1.68	0.00	1.47	0.00
7	ER1a	ExonRegion	0	0.00	0.06	0.00	6.78	0.00	2.18	0.00
8	E1a_E2a	KnownJunction	0	0.00	1.13	0.00	4.28	0.00	1.42	0.00
9	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.39	0.00
10	ER2a	ExonRegion	0	0.00	1.21	0.00	1.33	0.00	6.25	0.00
11	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	6.65	0.00
12	I2_SR2	SilentIntronRegion	0	0.00	0.00	0.39	1.08	10.05	2.53	4.68
13	I2_AR3	ActiveIntronRegion	0	3.58	0.58	16.27	10.78	165.51	12.27	51.32
14	ER3a	ExonRegion	0	0.00	0.01	0.00	1.34	0.00	3.87	0.00
15	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	1.41	0.00	3.06	0.00
16	ER4a	ExonRegion	0	0.00	0.36	0.00	5.49	0.00	2.65	0.00
17	E4a_E5a	KnownJunction	0	0.00	1.63	0.00	4.01	0.00	2.79	0.00
18	ER5a	ExonRegion	0	0.00	0.48	0.00	3.14	0.00	6.47	0.00
19	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.53	0.00
20	E5a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.51	0.00
22	ER7a	ExonRegion	0	0.00	0.00	0.34	0.68	0.00	1.15	0.00
23	E7a_E8a	KnownJunction	0	0.00	0.00	0.70	3.28	0.00	4.10	0.00
24	ER8a	ExonRegion	0	0.30	0.00	0.06	1.52	0.18	2.08	0.00
25	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.90	3.22	0.00
26	ER9a	ExonRegion	0	0.00	0.00	0.00	2.27	0.17	2.72	0.21
27	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E9a_E11a	KnownJunction	0	0.00	0.00	0.00	4.71	0.00	4.31	0.86
29	E10_Aa	NovelBoundary	0	284.10	179.36	293.72	206.27	306.88	202.98	273.21
30	ER10a	ExonRegion	0	2.37	0.00	0.78	0.00	14.22	0.00	0.00
31	E10_Da	NovelBoundary	0	1034.88	778.40	590.94	442.86	440.68	440.05	477.95
32	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	ER11a	ExonRegion	0	0.00	0.00	0.00	2.18	0.18	2.77	0.30
34	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.79
35	E11a_E13a	KnownJunction	0	0.00	0.00	0.00	1.68	0.00	1.47	0.00
36	ER12a	ExonRegion	0	0.00	0.00	0.00	0.75	0.86	0.71	0.13
37	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	1.15	0.00	0.00
38	ER13a	ExonRegion	0	0.00	0.00	0.00	1.76	0.18	1.42	0.00
39	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	E13b_E14a	KnownJunction	0	0.00	0.00	0.00	3.31	0.00	0.00	0.00
41	ER13b	ExonRegion	0	0.00	0.00	0.00	2.49	0.81	0.51	0.00
42	ER14a	ExonRegion	0	0.43	0.42	0.04	2.09	0.58	2.96	0.08