Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PPAP2A	Gene	0	27.73	61.40	117.73	324.11	285.36	249.28	86.36
2	307259	Transcript	0	0	0	0	0	0	0	0
3	396876	Transcript	0	0	0	0	0	0	0	0
4	396875	Transcript	0	0	0	0	0	0	0	0
5	264775	Transcript	0	0	0	0	0	0	0	0
6	ER1a	ExonRegion	0	6.57	34.21	23.24	140.05	67.68	122.06	22.89
7	E1a_E2a	KnownJunction	1	0.00	10.96	10.76	76.56	18.17	51.48	10.91
8	E1a_E3a	KnownJunction	0	15.72	61.11	87.57	291.20	261.47	261.35	97.96
9	E1a_E4a	NovelJunction	0	7.48	16.26	9.10	84.80	79.90	43.23	2.72
10	ER2a	ExonRegion	0	9.33	21.70	18.69	103.06	35.54	94.95	11.47
11	E2a_E3a	NovelJunction	0	0.00	6.07	5.91	25.98	5.35	22.43	2.42
12	E2a_E4a	KnownJunction	0	0.00	7.15	12.07	35.98	20.59	43.23	8.77
13	ER3a	ExonRegion	0	40.20	101.58	178.04	453.15	283.97	417.88	148.71
14	E3_Da	NovelBoundary	0	10.26	8.93	10.22	12.00	17.82	17.23	3.41
15	E3a_E4a	KnownJunction	0	38.09	105.98	186.74	438.90	422.10	363.35	149.25
16	I3_SR3	SilentIntronRegion	0	14.38	9.64	16.18	13.30	24.20	20.52	5.09
17	ER4a	ExonRegion	0	72.89	137.05	307.58	751.67	744.71	569.40	216.25
18	E4_Da	NovelBoundary	1	10.25	10.82	12.04	19.05	6.29	24.41	1.63
19	E4a_E5a	KnownJunction	0	75.04	143.49	269.04	780.47	885.39	465.89	188.20
20	E4a_E6a	NovelJunction	0	0.00	0.00	0.00	12.68	3.00	3.43	0.00
21	I4_AR1	ActiveIntronRegion	0	11.85	11.13	14.54	22.61	4.57	23.82	5.59
22	I4_AR2	ActiveIntronRegion	0	13.79	14.71	19.23	21.16	2.68	19.72	5.43
23	I4_AR3	ActiveIntronRegion	0	13.42	14.82	20.41	19.79	3.10	28.08	4.09
24	I4_SR2	SilentIntronRegion	0	15.10	7.45	15.48	12.28	4.43	23.17	2.46
25	I4_AR4	ActiveIntronRegion	0	16.18	9.79	17.78	23.50	5.97	14.52	4.10
26	I4_AR5	ActiveIntronRegion	0	10.24	9.53	14.05	13.78	5.12	22.09	3.71
27	E5_Aa	NovelBoundary	1	15.69	18.13	16.90	20.86	0.99	22.48	3.24
28	ER5a	ExonRegion	0	63.22	131.87	263.51	768.67	732.83	502.11	222.30
29	E5_Da	NovelBoundary	0	14.34	15.29	11.02	12.22	5.62	15.49	4.72
30	E5a_E6a	KnownJunction	0	48.83	121.58	250.85	714.58	621.80	551.06	237.51
31	I5	Intron	0	13.27	19.78	23.02	32.25	4.75	31.74	7.92
32	I5_AR1	ActiveIntronRegion	0	11.01	14.71	18.06	23.38	3.15	21.99	7.63
33	I5_SR2	SilentIntronRegion	0	10.75	12.30	18.66	24.13	3.87	21.52	6.92
34	I5_AR2	ActiveIntronRegion	0	9.56	16.15	13.63	24.90	4.90	24.17	4.65
35	I5_SR3	SilentIntronRegion	0	16.55	26.63	29.92	42.98	5.63	42.55	10.21
36	I5_AR3	ActiveIntronRegion	0	15.04	17.21	29.25	30.18	6.17	27.49	6.72
37	ER6a	ExonRegion	0	52.64	119.56	242.81	671.45	697.61	460.93	171.88
38	E6_Da	NovelBoundary	0	15.07	12.87	25.02	25.36	9.96	24.52	6.72
39	E6a_E7a	KnownJunction	0	35.17	70.41	179.83	590.56	534.23	403.12	126.60
40	E7_Aa	NovelBoundary	0	55.21	62.87	77.37	105.87	109.13	81.55	32.48
41	ER7a	ExonRegion	0	10.62	13.89	48.77	103.35	105.68	74.65	29.24