Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	FAT1	Gene	0	221.46	179.28	535.90	467.03	208.86	1014.16	599.18
2	260147	Transcript	0	221.95	180.07	564.06	492.07	256.02	1056.15	675.25
3	IG29_AR4	ActiveIntergenicRegion	0	21.46	23.21	25.41	41.02	1.39	92.44	27.48
4	IG29_SR2	SilentIntergenicRegion	0	7.39	6.03	7.24	8.48	1.65	6.06	4.74
5	IG29_AR3	ActiveIntergenicRegion	0	21.67	20.23	10.70	19.58	0.81	24.70	7.56
6	IG29_AR2	ActiveIntergenicRegion	0	15.20	13.91	13.05	14.27	1.61	22.26	9.11
7	IG29_SR1	SilentIntergenicRegion	0	3.44	4.33	4.28	8.18	0.36	8.99	1.09
8	ER1a	ExonRegion	0	0.32	3.81	1.53	7.07	3.63	2.15	2.13
9	E1a_E2a	KnownJunction	0	1.50	12.16	4.77	18.83	4.54	5.79	2.38
10	ER2a	ExonRegion	0	203.10	175.22	410.94	361.87	84.61	587.70	371.11
11	E2a_E3a	KnownJunction	0	194.40	147.83	403.99	279.74	100.79	541.70	339.22
12	ER3a	ExonRegion	0	387.01	206.15	747.03	446.20	149.50	954.58	521.84
13	E3a_E4a	KnownJunction	0	317.81	118.33	540.63	301.44	145.99	581.96	390.14
14	E4_Aa	NovelBoundary	1	127.08	4.39	212.87	0.00	1.13	1.29	4.10
15	ER4a	ExonRegion	0	404.67	166.53	877.82	387.04	188.07	869.05	661.51
16	E4a_E5a	KnownJunction	0	480.29	198.40	1176.90	447.06	235.95	1078.64	806.37
17	ER5a	ExonRegion	0	259.57	157.28	604.94	333.53	105.50	753.91	449.19
18	E5a_E6a	KnownJunction	0	179.80	115.36	451.37	275.44	91.70	508.66	418.38
19	ER6a	ExonRegion	0	178.47	133.10	480.82	314.01	108.01	624.79	484.04
20	E6a_E7a	KnownJunction	0	105.43	122.00	304.94	285.95	74.25	530.23	379.98
21	ER7a	ExonRegion	0	151.33	142.37	401.21	295.94	101.67	554.54	451.15
22	E7a_E8a	KnownJunction	0	116.66	138.42	371.01	305.43	90.78	484.86	485.02
23	ER8a	ExonRegion	0	141.31	140.17	424.27	295.07	110.63	521.27	497.97
24	E8a_E9a	KnownJunction	0	163.80	135.80	410.52	317.48	121.35	518.41	467.94
25	ER9a	ExonRegion	0	116.56	110.39	292.89	237.56	83.94	417.49	343.86
26	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER10a	ExonRegion	0	188.88	155.98	505.51	387.33	169.40	734.61	567.54
28	E10a_E11a	KnownJunction	0	326.99	206.20	629.71	519.88	341.67	949.35	649.84
29	ER11a	ExonRegion	0	423.14	217.69	849.68	687.77	354.11	1290.91	829.66
30	E11a_E12a	KnownJunction	0	448.86	191.89	953.31	625.86	320.00	1265.62	953.13
31	ER12a	ExonRegion	0	381.11	234.29	857.16	697.66	341.23	1389.44	958.15
32	E12a_E13a	KnownJunction	0	370.08	250.34	921.08	745.17	500.20	1446.36	1067.09
33	ER13a	ExonRegion	0	189.40	186.35	562.48	516.15	240.29	1028.04	660.19
34	E13a_E14a	KnownJunction	0	208.54	129.26	702.06	432.05	288.74	903.61	577.44
35	ER14a	ExonRegion	0	234.16	212.65	748.82	543.32	278.45	1241.20	739.86
36	E14a_E15a	KnownJunction	0	272.73	214.24	816.59	636.61	323.55	1297.99	763.79
37	ER15a	ExonRegion	0	247.72	228.74	706.45	664.62	314.70	1434.73	914.70
38	E15a_E16a	KnownJunction	1	153.58	229.69	465.57	641.03	339.15	1434.97	891.97
39	ER16a	ExonRegion	1	129.14	193.95	420.03	551.31	248.99	1137.97	739.96
40	E16a_E17a	KnownJunction	0	138.08	141.50	459.12	419.56	329.63	928.32	663.26
41	ER17a	ExonRegion	0	150.64	178.77	476.53	472.68	251.35	1005.85	714.46
42	E17a_E18a	KnownJunction	0	183.94	187.45	525.38	437.01	243.14	921.67	617.78
43	ER18a	ExonRegion	0	182.98	191.59	592.09	519.86	255.65	1091.14	765.82
44	E18a_E19a	KnownJunction	0	193.52	186.68	599.57	509.45	292.06	1062.61	767.86
45	ER19a	ExonRegion	0	216.96	211.72	598.17	600.54	335.50	1235.26	874.09
46	E19a_E20a	KnownJunction	0	122.59	149.09	361.27	427.55	266.38	808.52	629.18
47	ER20a	ExonRegion	1	107.59	156.46	371.38	471.00	232.49	898.22	670.34
48	E20a_E21a	KnownJunction	1	93.26	178.25	370.71	513.05	209.34	948.04	675.37
49	I20	Intron	0	47.35	9.84	77.08	21.69	2.09	36.57	11.67
50	I20_SR2	SilentIntronRegion	0	51.22	7.70	73.31	19.27	1.86	25.10	12.56
51	I20_AR2	ActiveIntronRegion	0	50.94	8.03	92.09	19.05	1.06	44.78	9.93
52	E21_Aa	NovelBoundary	1	61.99	20.26	97.47	24.90	12.54	59.90	12.77
53	ER21a	ExonRegion	0	192.68	221.79	619.36	641.23	352.84	1235.45	873.61
54	E21a_E22a	KnownJunction	0	214.70	233.74	597.66	679.88	311.77	1249.49	839.49
55	ER22a	ExonRegion	0	240.94	231.58	711.39	672.93	376.18	1343.05	884.18
56	E22a_E23a	KnownJunction	0	182.09	201.40	569.99	637.37	383.05	1391.68	828.44
57	ER23a	ExonRegion	0	217.44	233.18	640.29	734.29	400.04	1488.26	1046.41
58	E23a_E24a	KnownJunction	0	231.87	241.57	693.07	810.67	414.70	1667.03	963.75
59	ER24a	ExonRegion	0	297.45	266.32	739.12	857.08	453.64	1827.11	1183.78
60	E24a_E25a	KnownJunction	0	262.65	257.09	709.09	791.57	430.30	1624.87	1232.92
61	E24a_E26a	NovelJunction	0	4.01	5.75	2.73	32.86	3.23	31.28	8.61
62	I24	Intron	0	47.44	12.29	59.40	13.73	5.88	11.67	19.24
63	I24_SR1	SilentIntronRegion	0	51.33	12.56	63.73	13.50	5.60	11.86	20.14
64	ER25a	ExonRegion	0	307.25	258.95	826.91	739.54	403.89	2115.64	1001.56
65	E25a_E26a	KnownJunction	0	264.80	208.41	675.95	686.11	427.98	2137.79	810.36
66	ER26a	ExonRegion	0	321.04	246.92	639.56	669.18	453.87	2055.62	823.88
67	E26a_E27a	KnownJunction	0	359.62	306.54	506.76	584.95	533.97	1750.80	903.94
68	I26_AR4	ActiveIntronRegion	0	47.31	6.52	42.28	7.61	6.33	18.95	24.61
69	I26_SR4	SilentIntronRegion	0	73.05	8.37	63.11	9.41	9.46	47.45	33.56
70	I26_AR6	ActiveIntronRegion	0	57.45	15.94	42.28	10.18	9.48	40.68	26.77
71	I26_SR5	SilentIntronRegion	0	58.96	17.28	48.05	8.82	7.50	40.33	31.55
72	ER27a	ExonRegion	1	304.89	180.06	567.65	645.71	349.82	2098.83	631.96