Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	LARP2	Gene	0	58.50	95.09	56.54	114.40	65.33	121.97	66.52
2	394288	Transcript	0	0.00	0.00	0.00	0.00	0.33	0.00	0.00
3	264584	Transcript	0	3.70	13.07	9.88	23.49	7.25	24.16	13.24
4	326639	Transcript	0	0	0	0	0	0	0	0
5	354456	Transcript	0	0.97	0.00	1.33	0.00	0.00	0.00	0.36
6	IG4_SR1	SilentIntergenicRegion	0	2.71	0.00	1.37	0.00	9.23	0.47	1.29
7	IG4_AR2	ActiveIntergenicRegion	0	14.48	4.97	11.46	1.30	35.19	0.98	6.82
8	IG4_SR4	SilentIntergenicRegion	0	12.25	4.10	10.89	1.70	35.96	1.20	5.24
9	IG4_AR3	ActiveIntergenicRegion	0	6.49	2.73	3.01	1.88	21.12	3.20	5.75
10	ER1a	ExonRegion	0	7.91	24.63	8.25	47.96	5.37	34.49	7.92
11	E1a_E2a	KnownJunction	0	11.73	58.80	14.47	106.47	8.25	82.19	18.79
12	I1_AR1	ActiveIntronRegion	0	1.97	16.64	3.41	27.64	1.13	22.68	2.10
13	ER2a	ExonRegion	0	16.84	104.35	32.47	136.02	29.81	118.07	25.90
14	E2a_E3a	KnownJunction	0	25.15	179.64	47.85	200.85	35.18	179.08	35.67
15	ER3a	ExonRegion	0	47.69	229.10	83.61	300.27	42.92	244.79	79.80
16	E3a_E4a	KnownJunction	0	70.63	249.32	111.90	361.34	78.49	311.79	106.48
17	ER4a	ExonRegion	0	82.43	239.25	117.45	325.18	111.42	297.83	112.17
18	E4a_E5a	KnownJunction	0	59.62	210.33	89.89	293.80	99.68	276.98	83.32
19	E4a_E6a	KnownJunction	0	0.00	12.74	5.27	24.65	6.36	16.62	3.58
20	ER5a	ExonRegion	0	97.30	284.69	125.95	378.87	145.02	338.02	131.81
21	E5a_E6a	KnownJunction	0	104.63	261.03	127.95	330.57	149.36	276.09	116.40
22	E5a_E8a	NovelJunction	1	3.39	4.07	6.18	18.26	1.18	7.42	6.54
23	E5a_E9a	NovelJunction	0	0.00	6.52	0.00	10.05	0.00	6.99	0.00
24	ER6a	ExonRegion	0	100.95	268.14	132.14	376.47	182.53	290.08	122.35
25	E6a_E7a	KnownJunction	0	102.41	225.49	146.53	357.95	188.55	233.24	111.71
26	E6a_E8a	NovelJunction	0	7.73	8.22	7.92	3.82	4.45	9.84	8.44
27	ER7a	ExonRegion	0	115.04	272.01	142.71	351.06	214.85	237.12	133.53
28	E7a_E8a	KnownJunction	0	88.42	238.26	127.19	269.42	201.39	181.03	123.87
29	E7a_E9a	NovelJunction	0	2.37	6.09	3.38	1.00	0.00	9.35	0.00
30	I7_AR2	ActiveIntronRegion	1	14.22	6.88	9.60	27.43	14.58	24.32	2.14
31	ER8a	ExonRegion	0	120.94	290.84	154.94	379.86	217.73	271.11	146.56
32	E8a_E9a	KnownJunction	0	110.27	291.48	139.81	370.82	174.53	299.06	144.50
33	ER9a	ExonRegion	0	125.98	259.92	142.10	351.95	195.92	276.22	124.70
34	E9_Da	NovelBoundary	1	20.23	24.85	24.40	19.40	11.20	9.49	3.63
35	E9a_E10a	KnownJunction	0	48.33	48.73	51.58	90.32	84.67	108.51	33.81
36	I9	Intron	0	21.18	41.76	19.79	58.47	25.96	47.36	18.13
37	I9_AR1	ActiveIntronRegion	0	31.81	17.33	21.86	23.66	9.85	14.93	6.63
38	I9_SR2	SilentIntronRegion	0	19.83	15.57	15.82	21.34	12.15	22.88	6.24
39	I9_AR2	ActiveIntronRegion	1	69.91	165.32	73.77	237.15	100.87	189.27	68.39
40	ER10a	ExonRegion	0	84.71	68.78	68.58	89.87	95.01	143.51	56.90
41	E10a_E11a	KnownJunction	0	73.20	53.86	70.20	79.70	106.07	126.41	54.56
42	ER11a	ExonRegion	0	70.96	74.16	58.96	86.08	88.42	125.57	74.03
43	E11_Da	NovelBoundary	0	10.56	13.92	7.47	8.94	37.18	17.50	9.19
44	E11a_E13a	KnownJunction	1	32.93	37.96	28.67	27.93	20.47	76.33	30.80
45	I11	Intron	0	4.19	6.47	4.49	11.32	19.58	10.54	6.78
46	I11_AR1	ActiveIntronRegion	0	4.72	8.08	3.90	2.72	21.95	7.14	6.17
47	I11_AR2	ActiveIntronRegion	0	3.07	3.64	1.35	1.25	20.38	0.20	6.30
48	I11_AR3	ActiveIntronRegion	0	3.07	2.16	1.13	1.25	18.00	0.00	3.82
49	I11_AR4	ActiveIntronRegion	0	2.21	1.91	4.54	7.40	21.71	13.12	2.45
50	I11_AR5	ActiveIntronRegion	0	7.68	5.94	9.71	16.07	42.29	21.66	6.90
51	I11_SR2	SilentIntronRegion	1	7.50	9.17	10.10	23.65	37.11	25.83	11.71
52	I11_AR6	ActiveIntronRegion	0	7.50	7.97	7.09	22.16	32.45	17.74	11.08
53	I11_AR7	ActiveIntronRegion	0	6.88	15.61	11.60	33.17	34.19	28.18	9.86
54	I11_AR8	ActiveIntronRegion	0	4.25	17.57	8.09	26.16	40.43	21.90	12.26
55	I11_AR9	ActiveIntronRegion	0	2.11	2.84	2.58	9.01	13.20	9.38	3.09
56	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	0.33	0.00	0.00
57	ER13a	ExonRegion	1	37.14	37.57	25.67	24.50	21.65	67.96	38.39
58	E13a_E14a	KnownJunction	0	8.80	8.54	1.25	3.79	3.14	8.87	2.02
59	E13a_E15a	KnownJunction	1	7.39	13.40	14.49	22.32	8.14	31.70	22.90
60	E13a_E16a	NovelJunction	0	0.00	3.26	1.78	3.68	0.00	9.51	0.00
61	E14_Aa	NovelBoundary	1	2.70	4.15	0.00	1.30	5.79	1.29	18.85
62	ER14a	ExonRegion	0	6.23	6.28	0.55	0.31	2.97	6.57	1.56
63	E14a_E15a	KnownJunction	0	5.16	0.00	0.00	0.00	2.07	1.66	0.00
64	ER15a	ExonRegion	1	39.37	38.28	31.31	34.72	20.12	84.95	66.27
65	E15a_E16a	KnownJunction	1	51.76	41.80	35.15	57.43	29.05	115.80	91.06
66	ER16a	ExonRegion	1	37.90	40.74	29.78	36.36	27.79	93.31	59.76
67	E16a_E17a	KnownJunction	1	27.09	53.30	16.15	43.70	31.47	85.95	49.50
68	ER17a	ExonRegion	1	39.09	54.33	30.57	34.65	19.98	92.25	50.54
69	E17a_E18a	KnownJunction	1	30.49	35.57	25.56	33.95	19.96	77.61	46.38
70	ER18a	ExonRegion	1	28.74	28.27	25.71	26.98	16.33	63.17	40.94
71	E18a_E19a	KnownJunction	1	26.27	18.71	22.42	16.15	13.02	50.54	27.96
72	E18a_E20a	NovelJunction	1	5.59	0.00	6.02	5.31	0.00	12.65	4.87
73	ER19a	ExonRegion	1	33.90	29.55	24.70	16.62	10.09	54.30	42.57
74	E19a_E20a	KnownJunction	1	41.17	30.53	26.13	23.19	20.82	69.01	41.16
75	ER20a	ExonRegion	1	63.10	47.63	41.12	26.79	22.81	98.75	52.70
76	E20a_E21a	KnownJunction	1	55.93	52.04	34.40	20.91	22.52	82.97	35.46
77	E20a_E22a	KnownJunction	0	1.47	0.00	2.04	0.00	0.00	0.00	0.57
78	ER21a	ExonRegion	1	38.57	22.45	22.14	11.95	16.97	37.45	40.51
79	ER22a	ExonRegion	0	0.48	0.00	0.63	0.00	0.00	0.00	0.14
80	IG5_AR1	ActiveIntergenicRegion	0	14.49	9.17	8.06	7.97	3.15	31.15	9.12