Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SH3D19	Gene	0	149.00	167.31	208.45	124.79	180.05	75.85	111.95
2	304527	Transcript	0	5.33	10.07	4.98	2.37	2.96	4.79	2.11
3	409252	Transcript	0	0	0	0	0	0	0	0
4	409598	Transcript	0	76.54	84.65	98.05	82.19	115.36	39.56	75.30
5	IG42_SR6	SilentIntergenicRegion	0	3.50	7.54	7.08	6.70	3.46	1.88	3.57
6	IG42_AR7	ActiveIntergenicRegion	0	1.75	8.00	5.62	8.04	2.73	1.50	3.27
7	IG42_SR5	SilentIntergenicRegion	0	2.38	10.93	3.16	6.17	2.08	1.80	4.47
8	IG42_AR6	ActiveIntergenicRegion	0	3.44	12.41	6.25	7.67	3.30	0.91	3.95
9	IG42_AR5	ActiveIntergenicRegion	0	4.00	17.79	12.92	9.53	2.17	3.68	7.64
10	IG42_AR2	ActiveIntergenicRegion	0	33.13	21.14	8.22	3.96	3.36	15.21	1.63
11	IG42_SR1	SilentIntergenicRegion	0	10.47	6.22	6.07	2.43	2.13	1.81	2.57
12	ER1a	ExonRegion	0	6.68	16.70	3.99	1.27	2.79	8.23	3.85
13	E1_Ab	KnownBoundary	0	15.50	37.44	7.07	5.61	3.32	18.20	7.61
14	ER1b	ExonRegion	1	39.97	92.56	8.60	15.84	2.70	39.56	6.70
15	E1a_E2a	KnownJunction	1	91.48	92.66	10.16	33.29	2.07	55.07	7.35
16	ER2a	ExonRegion	1	89.31	152.43	51.67	69.99	37.94	54.71	31.84
17	E2a_E3a	KnownJunction	0	79.39	191.76	93.45	132.26	74.14	66.28	52.12
18	E2a_E4a	NovelJunction	1	1.44	20.33	10.56	6.15	4.17	0.00	3.53
19	I2_AR2	ActiveIntronRegion	1	33.12	25.52	7.12	5.12	7.10	8.05	3.59
20	ER3a	ExonRegion	0	82.05	200.27	101.14	114.23	57.76	68.92	62.42
21	E3a_E4a	KnownJunction	0	43.19	146.38	73.58	83.20	51.78	52.53	44.13
22	ER4a	ExonRegion	0	68.43	210.51	99.69	124.35	56.97	89.61	64.59
23	E4a_E5a	KnownJunction	0	69.70	219.18	115.06	120.83	52.68	90.96	62.91
24	ER5a	ExonRegion	0	81.99	277.32	167.13	166.42	100.96	102.26	91.24
25	E5a_E6a	KnownJunction	0	114.86	299.89	239.81	182.78	143.99	110.09	135.32
26	ER6a	ExonRegion	0	113.46	258.73	237.22	160.50	133.96	106.56	128.95
27	E6a_E7a	KnownJunction	0	2.44	3.02	2.21	2.17	2.21	1.13	0.60
28	E6a_E7b	NovelJunction	0	166.75	293.29	312.31	198.98	185.88	111.94	141.57
29	E6b_E7b	KnownJunction	0	19.93	28.71	30.21	12.41	11.02	8.31	7.90
30	ER6b	ExonRegion	0	22.71	29.70	34.09	13.99	17.37	14.03	11.02
31	ER7a	ExonRegion	0	6.88	10.49	8.74	3.68	3.87	5.02	1.87
32	ER7b	ExonRegion	0	166.44	269.63	260.36	179.56	173.22	106.35	136.75
33	E7a_E8a	KnownJunction	0	99.91	118.25	147.31	72.47	160.45	42.37	142.67
34	E7a_E9a	NovelJunction	1	18.13	18.65	31.24	16.55	10.44	7.10	4.13
35	I7_AR2	ActiveIntronRegion	0	18.69	35.14	18.19	22.08	6.01	22.87	4.00
36	I7_AR3	ActiveIntronRegion	0	49.39	48.24	37.68	27.58	12.33	15.95	7.87
37	I7_SR4	SilentIntronRegion	0	32.49	45.14	27.46	32.05	16.69	18.01	9.88
38	I7_AR4	ActiveIntronRegion	0	32.44	83.93	40.47	48.14	20.95	30.12	18.98
39	I7_AR5	ActiveIntronRegion	0	25.94	85.14	23.32	56.35	12.94	20.64	13.80
40	I7_SR5	SilentIntronRegion	0	12.47	33.54	13.02	26.77	7.92	16.11	8.03
41	I7_AR7	ActiveIntronRegion	0	18.61	41.90	19.61	26.17	11.05	17.57	9.20
42	E8_Aa	NovelBoundary	1	44.60	50.15	31.95	31.70	9.38	26.10	9.37
43	ER8a	ExonRegion	0	144.99	178.00	212.50	129.41	211.64	76.40	174.48
44	E8a_E9a	KnownJunction	0	114.01	166.85	189.75	115.60	221.79	71.85	153.76
45	ER9a	ExonRegion	0	143.74	208.27	230.41	137.07	173.47	92.08	183.48
46	E9a_E10a	KnownJunction	0	153.23	196.72	244.54	146.45	182.21	89.81	172.61
47	ER10a	ExonRegion	0	116.03	155.97	210.39	126.26	192.76	66.99	134.83
48	E10a_E11a	KnownJunction	0	100.59	133.35	186.54	108.26	162.20	63.03	110.14
49	ER11a	ExonRegion	0	105.00	152.14	174.85	107.11	162.17	63.59	131.10
50	E11a_E12a	KnownJunction	1	41.42	68.10	54.71	50.58	77.76	13.48	66.14
51	E11a_E13a	KnownJunction	0	76.54	84.65	98.05	82.19	115.36	39.56	75.30
52	ER12a	ExonRegion	0	46.44	65.69	61.05	43.39	82.98	17.75	64.12
53	E12a_E13a	KnownJunction	0	44.60	82.05	53.26	38.12	75.73	18.01	44.84
54	ER13a	ExonRegion	0	127.77	189.98	186.15	145.74	187.71	60.82	144.26
55	E13a_E14a	KnownJunction	0	105.81	157.76	154.58	133.64	190.72	46.02	150.78
56	I13	Intron	0	16.81	37.95	21.56	47.08	4.11	37.97	5.93
57	I13_AR1	ActiveIntronRegion	0	29.94	75.08	39.33	89.49	7.52	73.76	10.40
58	I13_SR2	SilentIntronRegion	0	22.53	40.13	34.71	53.60	6.54	33.51	8.02
59	E14_Aa	NovelBoundary	0	27.05	95.37	33.81	135.97	10.24	102.11	15.86
60	ER14a	ExonRegion	0	104.73	151.54	164.98	134.07	213.43	43.95	129.97
61	E14_Da	NovelBoundary	0	23.28	118.01	28.98	118.14	5.23	116.10	12.50
62	E14a_E15a	KnownJunction	0	111.29	139.48	176.37	123.86	175.75	42.10	105.32
63	I14	Intron	0	14.27	24.29	14.63	27.74	2.51	19.31	4.59
64	I14_SR1	SilentIntronRegion	0	14.30	24.34	14.66	27.79	2.51	19.34	4.60
65	ER15a	ExonRegion	0	117.57	150.71	176.87	137.20	192.42	47.84	119.39
66	E15a_E16a	KnownJunction	0	94.55	118.22	163.49	113.59	178.04	47.41	96.03
67	ER16a	ExonRegion	0	96.84	122.76	166.21	111.06	188.41	46.07	95.41
68	E16a_E17a	KnownJunction	0	91.28	107.03	138.95	113.43	154.45	41.81	88.96
69	E16a_E18a	NovelJunction	0	6.41	23.93	6.77	8.61	0.00	7.18	1.46
70	ER17a	ExonRegion	0	107.62	128.43	176.57	105.64	165.80	61.03	98.23
71	E17a_E18a	KnownJunction	0	74.09	119.72	129.68	92.11	145.44	55.34	74.58
72	ER18a	ExonRegion	0	102.41	126.96	159.56	96.30	156.70	56.16	101.21
73	E18a_E19a	KnownJunction	0	101.36	111.68	167.53	83.33	180.76	46.60	101.48
74	ER19a	ExonRegion	0	84.79	118.84	133.46	108.13	153.11	48.97	89.97
75	E19a_E20a	KnownJunction	0	119.15	101.22	141.86	81.46	174.05	32.51	77.16
76	ER20a	ExonRegion	0	149.07	111.73	181.63	108.75	257.82	51.34	95.15
77	E20_Da	NovelBoundary	0	44.36	27.30	40.32	11.05	38.29	17.26	18.83
78	E20a_E21a	KnownJunction	0	200.23	129.33	208.90	120.47	328.83	71.31	112.34
79	I20_AR1	ActiveIntronRegion	0	52.67	31.17	31.84	28.39	20.82	21.46	15.48
80	I20_AR6	ActiveIntronRegion	0	46.82	27.19	29.07	35.90	12.58	22.95	18.22
81	E21_Aa	NovelBoundary	0	60.72	47.50	38.76	27.50	18.93	25.38	15.98
82	ER21a	ExonRegion	0	200.00	129.08	248.32	115.79	229.78	76.85	111.06
83	ER21b	ExonRegion	0	5.12	10.12	8.13	0.00	14.31	2.45	3.82
84	IG41	Intergenic	0	13.26	8.97	14.38	11.12	6.97	6.81	6.29
85	IG41_SR1	SilentIntergenicRegion	0	13.45	8.42	13.42	10.38	6.11	6.68	5.97
86	IG41_AR1	ActiveIntergenicRegion	0	9.90	19.98	33.69	26.08	24.07	9.51	12.64