Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC025538.6	Gene	0	0.05	0.00	0.11	0.06	0.08	0.00	0.07
2	399366	Transcript	0	24.05	30.35	48.79	19.48	8.49	13.35	25.00
3	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	E1_Da	NovelBoundary	0	227.60	155.32	344.64	123.54	89.28	95.81	109.16
5	E1a_E2a	KnownJunction	0	113.02	110.52	193.53	69.11	59.25	39.66	56.12
6	ER2a	ExonRegion	0	0.00	0.00	0.07	0.00	0.08	0.00	0.00
7	E2_Da	NovelBoundary	0	38.92	50.23	72.46	26.50	49.96	18.41	65.41
8	E2a_E3a	KnownJunction	0	55.23	101.96	147.68	67.13	0.00	53.81	118.74
9	E3_Aa	NovelBoundary	0	30.98	48.84	87.87	45.70	40.85	39.18	75.21
10	ER3a	ExonRegion	0	0.12	0.00	0.21	0.15	0.13	0.00	0.16
11	E3_Da	NovelBoundary	0	61.27	113.83	183.95	111.07	34.44	89.48	93.81
12	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E4_Aa	NovelBoundary	0	69.51	191.36	163.95	103.30	46.27	105.62	119.14
14	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	IG29_AR7	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.84	0.28	11.66	0.00
16	IG29_SR7	SilentIntergenicRegion	0	0.00	0.00	0.00	0.92	0.20	10.25	0.00