Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 CAMK2D Gene 0 36.62 33.85 67.42 102.90 24.11 105.23 126.89 2 379771 Transcript 0 0.42 1.14 1.84 2.63 0.00 2.41 0.68 3 394522 Transcript 0 0 0 0 0 0 0 0 4 342666 Transcript 1 5.60 6.31 9.38 7.12 6.16 23.52 32.87 5 394526 Transcript 0 0.01 0.00 0.01 0.01 0.00 0.09 0.01 6 296402 Transcript 0 21.38 3.18 15.63 21.67 11.02 22.48 39.40 7 394524 Transcript 0 15.11 10.05 23.07 49.52 14.62 48.58 40.42 8 379773 Transcript 0 4.72 5.35 10.33 5.57 4.23 4.83 13.99 9 IG39_AR4 ActiveIntergenicRegion 0 0.15 1.19 3.21 2.70 0.52 10.90 1.49 10 IG39_AR1 ActiveIntergenicRegion 0 1.02 3.16 2.74 11.40 0.56 10.00 2.82 11 ER1a ExonRegion 0 3.50 26.02 4.90 50.70 3.58 51.92 24.88 12 E1_Ab KnownBoundary 1 9.26 43.45 16.43 92.95 4.08 94.95 59.56 13 ER1b ExonRegion 0 10.57 32.23 18.27 84.53 5.00 67.29 46.27 14 E1_Ac KnownBoundary 1 8.63 16.73 28.76 94.90 3.92 59.12 65.57 15 ER1c ExonRegion 1 10.36 35.26 42.66 105.38 6.61 93.49 86.74 16 E1a_E2a KnownJunction 0 22.56 53.25 66.25 141.09 9.20 120.57 120.31 17 ER2a ExonRegion 0 28.92 46.59 87.50 164.42 22.24 149.44 152.06 18 E2a_E3a KnownJunction 0 34.73 43.85 96.73 174.58 24.39 130.30 192.24 19 ER3a ExonRegion 0 44.30 58.05 111.93 184.22 23.66 185.35 201.44 20 E3a_E4a KnownJunction 0 34.03 46.26 97.22 165.61 22.43 198.85 160.91 21 ER4a ExonRegion 0 45.81 52.77 117.41 189.54 30.54 208.33 178.26 22 E4a_E5a KnownJunction 0 50.75 62.92 118.21 182.57 33.68 177.92 171.43 23 ER5a ExonRegion 0 78.02 58.46 147.41 212.13 47.56 196.51 218.81 24 E5a_E6a KnownJunction 0 100.76 51.91 176.47 224.45 64.55 237.90 238.12 25 E5a_E7a KnownJunction 0 0.00 0.00 0.00 2.71 0.00 4.98 0.00 26 ER6a ExonRegion 0 96.50 67.03 180.48 248.59 48.51 239.98 256.65 27 E6a_E8a KnownJunction 0 86.50 72.04 152.00 248.86 29.37 232.25 213.09 28 ER7a ExonRegion 0 1.51 2.71 4.68 5.47 0.00 3.71 1.23 29 E7a_E8a KnownJunction 0 1.02 4.15 6.37 7.59 0.00 5.76 2.87 30 ER8a ExonRegion 0 108.61 83.18 170.31 255.41 44.56 229.40 236.60 31 E8a_E9a KnownJunction 0 78.23 59.87 151.35 203.97 54.15 167.47 218.12 32 ER9a ExonRegion 0 73.07 58.53 145.25 213.56 51.41 149.21 222.90 33 E9a_E10a KnownJunction 0 72.62 59.79 133.41 233.61 34.83 167.47 201.86 34 ER10a ExonRegion 0 56.29 67.44 109.83 205.42 29.80 168.09 203.26 35 E10a_E11a KnownJunction 0 46.58 78.05 122.23 196.71 27.18 165.33 221.23 36 ER11a ExonRegion 0 44.86 69.68 123.74 180.70 35.36 186.61 237.36 37 E11a_E12a KnownJunction 0 44.45 71.41 102.70 174.20 40.46 173.45 226.95 38 ER12a ExonRegion 0 40.27 74.61 111.62 147.93 35.79 168.08 213.93 39 E12a_E13a KnownJunction 0 31.96 74.03 91.24 127.87 27.59 128.24 156.54 40 ER13a ExonRegion 0 40.41 78.46 111.09 166.05 26.95 154.36 197.97 41 E13a_E14a KnownJunction 0 30.03 44.48 78.56 136.02 33.10 123.92 129.14 42 ER14a ExonRegion 0 44.89 60.81 112.86 152.92 38.43 135.86 214.04 43 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 E14a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 E14a_E18a KnownJunction 0 33.88 41.19 77.89 91.78 45.78 82.17 164.21 46 E14a_E19a NovelJunction 1 2.94 3.65 7.17 5.15 0.00 16.37 0.89 47 ER15a ExonRegion 0 0.02 0.00 0.04 0.04 0.00 0.26 0.02 48 E15a_E18a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 ER16a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 ER17a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 ER18a ExonRegion 0 61.58 61.36 131.33 129.20 43.57 117.70 252.48 52 E18a_E19a KnownJunction 0 64.76 58.01 138.60 112.02 37.51 119.10 247.27 53 ER19a ExonRegion 0 66.92 61.61 154.78 168.14 43.39 164.46 290.95 54 E19a_E20a KnownJunction 0 63.41 63.31 129.86 174.33 28.65 164.71 217.09 55 ER20a ExonRegion 0 90.84 94.90 150.90 202.01 47.20 203.31 265.18 56 E20a_E21a KnownJunction 0 136.39 111.73 213.17 218.54 101.94 215.60 381.95 57 ER21a ExonRegion 0 91.85 79.80 138.74 175.39 55.25 182.07 276.49 58 E21_Da KnownBoundary 0 35.57 21.20 67.02 44.51 24.07 54.16 98.01 59 E21a_E22a KnownJunction 0 5.87 5.46 7.80 5.91 7.19 13.80 22.74 60 E21a_E23a KnownJunction 0 52.16 25.22 56.58 119.74 35.36 102.35 163.12 61 ER21b ExonRegion 0 35.87 15.74 57.85 39.99 22.95 47.93 88.80 62 E21_Db KnownBoundary 0 8.26 4.28 13.67 7.50 5.37 6.00 16.94 63 E21b_E23a KnownJunction 0 21.38 3.18 15.63 21.67 11.02 22.48 39.40 64 ER21c ExonRegion 0 4.72 5.35 10.33 5.57 4.23 4.83 13.99 65 I21 Intron 0 6.20 1.35 15.12 7.72 3.98 5.19 19.61 66 I21_SR1 SilentIntronRegion 0 6.80 2.66 15.40 10.43 2.63 6.68 17.70 67 I21_AR2 ActiveIntronRegion 0 5.89 1.02 17.02 6.80 4.94 5.50 19.10 68 ER22a ExonRegion 0 6.94 5.22 11.00 4.73 6.54 16.29 28.82 69 E22_Da NovelBoundary 1 4.71 8.33 16.61 6.45 5.23 16.96 37.26 70 E22b_E23a KnownJunction 1 6.06 5.70 7.80 7.91 6.45 22.65 33.52 71 ER22b ExonRegion 1 5.14 6.91 10.95 6.32 5.86 24.39 32.22 72 I22 Intron 0 4.95 1.76 15.53 6.96 5.42 5.15 20.87 73 I22_AR1 ActiveIntronRegion 0 4.96 1.76 15.55 6.97 5.43 5.16 20.91 74 E23_Aa NovelBoundary 0 6.49 4.15 15.40 4.80 10.03 1.26 15.45 75 ER23a ExonRegion 0 50.02 31.70 74.67 142.48 31.02 139.83 203.07 76 E23_Da KnownBoundary 0 39.02 34.49 72.73 118.88 31.35 157.02 159.35 77 ER23b ExonRegion 0 43.17 32.52 76.80 103.49 27.91 119.54 153.02 78 E23_Db KnownBoundary 0 15.14 9.69 21.99 46.43 28.42 33.79 45.92 79 ER23c ExonRegion 0 15.11 10.05 23.07 49.52 14.62 48.58 40.42 80 IG38_SR2 SilentIntergenicRegion 0 1.78 0.62 5.53 5.30 0.06 8.10 1.52 81 IG38_AR1 ActiveIntergenicRegion 0 1.97 0.83 6.29 9.15 0.09 9.83 2.10