Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SNCA	Gene	0	2.01	0.83	11.61	45.92	49.91	0.37	97.85
2	336904	Transcript	0	0.00	0.00	0.00	0.00	11.55	0.00	0.40
3	394989	Transcript	0	0.00	0.00	0.53	1.46	0.00	0.00	0.00
4	394991	Transcript	0	0	0	0	0	0	0	0
5	394986	Transcript	0	0.00	0.00	3.77	16.08	2.80	0.00	40.39
6	345009	Transcript	0	0.00	0.00	0.00	1.38	2.05	0.00	2.41
7	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	6.31	0.00	0.15
8	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	16.78	0.00	0.64
9	E2_Aa	NovelBoundary	0	0.00	0.00	0.89	0.00	29.16	1.66	21.78
10	E2_Ab	NovelBoundary	0	1.03	0.00	7.13	31.40	38.98	0.00	50.63
11	ER2a	ExonRegion	0	0.00	0.00	4.02	13.97	12.69	0.00	12.37
12	ER2b	ExonRegion	0	0.00	0.00	5.56	35.45	19.78	1.42	40.62
13	E2_Da	KnownBoundary	0	0.00	0.00	1.48	13.57	1.18	0.00	9.43
14	E2a_E3a	KnownJunction	0	1.03	0.00	8.61	54.43	39.47	2.97	124.02
15	ER2c	ExonRegion	0	0.00	0.00	2.16	8.67	1.48	0.00	20.41
16	E2b_E3a	KnownJunction	0	0.00	0.00	5.39	23.49	4.13	0.00	60.36
17	E3_Ab	NovelBoundary	0	0.00	0.00	14.79	55.27	27.66	0.00	133.77
18	ER3a	ExonRegion	0	0.00	0.00	16.57	74.82	62.73	1.23	177.63
19	ER3b	ExonRegion	0	1.39	0.00	14.90	82.68	70.22	0.12	157.06
20	E3a_E4a	KnownJunction	0	2.45	0.00	12.75	101.27	77.92	0.00	164.20
21	E3a_E5a	KnownJunction	0	0.00	0.00	0.53	1.46	0.00	0.00	0.00
22	ER4a	ExonRegion	0	1.43	0.00	17.87	111.69	90.70	1.23	215.73
23	E4a_E5a	KnownJunction	0	0.00	0.00	15.39	89.45	98.34	1.61	185.46
24	ER5a	ExonRegion	0	1.84	1.32	16.38	110.53	110.55	0.75	217.03
25	E5a_E6a	KnownJunction	0	1.03	7.36	21.00	97.77	103.53	1.29	221.21
26	E5a_E7a	KnownJunction	0	0.00	0.00	0.00	1.38	2.05	0.00	2.41
27	ER6a	ExonRegion	0	5.64	5.42	26.69	117.90	135.19	1.82	243.45
28	E6a_E7a	KnownJunction	0	9.26	5.36	23.97	124.81	147.79	1.66	246.90
29	ER7a	ExonRegion	0	4.50	1.67	19.99	64.12	78.60	0.24	149.33
30	E7_Da	KnownBoundary	0	1.87	0.00	9.67	1.44	12.49	0.00	13.86
31	ER7b	ExonRegion	1	1.13	0.00	6.02	5.50	16.16	0.00	20.38
32	E7_Db	KnownBoundary	0	2.07	0.00	7.14	8.91	10.40	0.00	19.63
33	ER7c	ExonRegion	0	0.35	0.00	2.92	3.12	10.91	0.00	16.87
34	IG22_AR21	ActiveIntergenicRegion	0	0.13	0.00	0.91	0.20	7.05	0.00	7.77
35	IG22_SR19	SilentIntergenicRegion	0	0.00	0.00	0.91	2.90	10.97	0.00	10.87
36	IG22_AR20	ActiveIntergenicRegion	0	0.00	0.00	0.68	2.49	16.78	0.00	12.14
37	IG22_SR18	SilentIntergenicRegion	0	0.00	0.00	0.73	1.39	7.79	0.00	9.55
38	IG22_AR18	ActiveIntergenicRegion	0	0.84	0.00	0.00	0.00	21.52	0.00	30.57
39	IG22_AR17	ActiveIntergenicRegion	0	0.85	0.00	0.07	0.19	35.76	0.00	19.49
40	IG22_SR15	SilentIntergenicRegion	0	0.50	0.00	0.00	0.00	34.73	0.00	2.42
41	IG22_AR16	ActiveIntergenicRegion	0	1.75	0.00	0.00	0.00	100.15	0.00	46.85
42	IG22_SR14	SilentIntergenicRegion	0	0.05	0.00	0.00	0.00	22.39	0.00	3.88
43	IG22_AR15	ActiveIntergenicRegion	0	0.05	0.00	0.14	0.25	87.17	0.00	12.83
44	IG22_AR14	ActiveIntergenicRegion	0	0.30	0.00	0.00	0.00	74.04	0.00	11.97
45	IG22_SR12	SilentIntergenicRegion	0	0.59	0.00	0.00	0.00	51.27	0.00	14.75
46	IG22_AR13	ActiveIntergenicRegion	0	0.13	0.00	0.06	0.00	15.99	0.00	5.71