Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 UBE2D3 Gene 0 1393.39 1385.59 1445.47 2027.57 1238.36 2306.25 968.72 2 338145 Transcript 0 1.93 4.10 2.48 9.92 13.45 4.56 4.75 3 350435 Transcript 0 0.67 1.63 0.72 0.00 2.19 1.34 0.00 4 349311 Transcript 1 74.57 271.50 34.28 110.90 125.82 322.47 120.99 5 394804 Transcript 0 3.96 5.60 0.91 3.18 0.47 3.67 0.31 6 394801 Transcript 0 41.07 157.97 72.76 386.51 68.37 365.01 39.66 7 321805 Transcript 0 14.05 39.71 25.05 56.25 39.47 59.54 30.09 8 394798 Transcript 0 0 0 0 0 0 0 0 9 394803 Transcript 0 0 0 0 0 0 0 0 10 343106 Transcript 0 50.60 115.61 61.07 225.00 10.29 183.16 25.96 11 357194 Transcript 0 0.00 0.04 0.00 0.00 0.00 0.00 0.00 12 ER1a ExonRegion 0 2.83 7.11 4.96 19.85 26.00 9.13 4.48 13 E1a_E4c KnownJunction 0 1.03 1.10 0.00 0.00 0.90 0.00 5.02 14 E1a_E6a KnownJunction 0 0.67 1.63 0.72 0.00 2.19 1.34 0.00 15 ER1b ExonRegion 0 1.67 2.76 2.83 10.49 3.32 1.01 4.19 16 ER2a ExonRegion 0 42.85 148.54 20.12 57.44 93.21 184.09 59.79 17 E2a_E4c KnownJunction 1 106.30 394.47 48.44 164.36 158.44 460.85 182.20 18 ER2b ExonRegion 0 55.71 205.31 27.10 79.81 125.93 238.46 72.52 19 ER2c ExonRegion 0 4.51 3.85 1.27 3.22 0.94 4.39 0.00 20 ER2d ExonRegion 0 88.77 127.59 80.03 264.52 66.85 262.59 40.88 21 E2b_E4b KnownJunction 0 3.40 7.36 0.55 3.14 0.00 2.95 0.62 22 E2b_E4c KnownJunction 0 41.07 157.97 72.76 386.51 68.37 365.01 39.66 23 ER3a ExonRegion 0 28.11 73.40 48.91 104.02 77.92 109.44 60.18 24 ER3b ExonRegion 0 141.40 348.63 188.98 513.69 252.10 377.03 270.05 25 E3a_E4b KnownJunction 0 0.00 6.02 1.18 8.48 1.01 9.65 0.00 26 E3a_E4c KnownJunction 0 59.50 219.89 71.59 277.77 33.89 241.57 93.03 27 ER4a ExonRegion 0 147.97 340.76 173.73 673.75 28.44 541.88 76.54 28 E4_Ab KnownBoundary 0 173.83 463.19 175.61 655.20 39.63 667.15 91.39 29 ER4b ExonRegion 0 272.23 746.04 251.89 1037.02 95.44 1191.75 176.95 30 E4_Ac KnownBoundary 0 500.48 979.50 439.26 1490.17 113.49 1771.81 322.94 31 ER4c ExonRegion 0 1333.44 2606.02 1545.02 3402.98 1182.00 4087.00 1383.31 32 E4a_E6a KnownJunction 0 1700.04 3626.90 2029.61 4459.68 2255.47 5646.09 1865.32 33 E4a_E8a NovelJunction 1 10.77 24.83 14.26 78.94 2.81 57.54 1.29 34 ER5a ExonRegion 0 0.00 0.04 0.00 0.00 0.00 0.00 0.00 35 ER6a ExonRegion 0 1954.05 3503.19 2073.40 4238.93 2060.01 5166.20 1587.83 36 E6a_E7a KnownJunction 0 1639.77 2677.22 1633.19 3341.90 2196.04 4029.69 1162.98 37 ER7a ExonRegion 0 2677.28 4066.66 2791.60 5117.65 2696.27 6182.01 2292.29 38 E7a_E8a KnownJunction 0 2910.62 3773.60 3156.55 4755.17 3140.65 5942.71 2627.22 39 ER8a ExonRegion 0 4577.12 5358.89 5110.89 6812.51 2412.53 9107.63 3688.03 40 E8a_E9a KnownJunction 0 3709.14 4233.06 4209.13 5524.96 1345.57 7662.45 2560.94 41 ER9a ExonRegion 0 3858.09 4599.22 4204.78 5806.93 2887.69 7504.59 2779.65 42 E9a_E10a KnownJunction 0 4739.42 4131.03 5348.94 5308.66 4365.65 7272.54 3837.32 43 ER10a ExonRegion 0 4866.22 3375.62 5194.38 4663.59 3914.02 5936.36 3125.93 44 E10a_E11a KnownJunction 0 0.00 1.00 0.55 2.06 0.85 0.00 0.00 45 E10a_E12a KnownJunction 0 3297.45 2952.59 4149.41 4082.95 1684.38 5115.14 2213.89 46 ER11a ExonRegion 0 0.00 0.00 0.10 0.00 1.55 1.23 0.00 47 E11b_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 1.47 0.00 48 ER11b ExonRegion 0 3.84 6.07 9.48 1.25 2.43 6.13 1.35 49 ER12a ExonRegion 0 2412.25 1964.89 2531.95 3103.82 2192.75 3338.37 1588.03 50 E12_Da KnownBoundary 0 1538.85 1033.07 1423.78 1597.21 1866.75 1536.27 881.98 51 ER12b ExonRegion 0 1092.65 820.68 943.63 1346.81 1291.66 1426.96 680.18 52 ER12c ExonRegion 0 32.27 25.51 37.26 32.42 80.99 41.68 31.03 53 IG24 Intergenic 0 25.71 23.14 30.17 30.22 50.65 27.75 18.37 54 IG24_AR3 ActiveIntergenicRegion 0 94.62 87.87 97.24 103.07 237.07 108.58 74.83 55 IG24_SR3 SilentIntergenicRegion 0 16.06 14.24 24.09 12.98 3.16 10.03 10.66 56 IG24_AR2 ActiveIntergenicRegion 0 34.52 27.33 52.53 41.10 6.58 18.08 16.61 57 IG24_SR2 SilentIntergenicRegion 0 4.71 3.76 8.42 8.17 0.58 5.16 1.95