Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TMEM165	Gene	0	1106.08	362.33	719.32	230.02	398.87	402.49	253.49
2	381334	Transcript	0	1424.71	387.32	918.69	272.39	598.86	455.15	325.55
3	IG25_AR1	ActiveIntergenicRegion	0	39.76	7.09	3.46	0.91	31.45	4.76	7.05
4	IG25_AR2	ActiveIntergenicRegion	0	34.89	1.77	2.16	0.72	27.52	0.69	3.59
5	IG25_SR2	SilentIntergenicRegion	0	23.35	1.15	1.83	0.79	18.44	1.85	2.41
6	IG25_AR3	ActiveIntergenicRegion	0	14.22	1.21	1.35	0.74	25.22	1.62	5.27
7	IG25_SR3	SilentIntergenicRegion	0	14.95	1.21	1.35	0.00	29.52	2.45	5.40
8	IG25_AR4	ActiveIntergenicRegion	0	21.80	1.26	3.11	0.38	23.77	1.86	2.07
9	IG25_AR5	ActiveIntergenicRegion	0	11.42	0.00	1.46	0.26	5.44	3.60	0.31
10	IG25_AR13	ActiveIntergenicRegion	0	1.43	11.92	2.25	4.46	0.11	31.06	0.41
11	ER1a	ExonRegion	0	62.78	103.44	45.62	53.28	21.35	107.18	25.53
12	E1a_E2a	KnownJunction	0	405.83	147.33	341.30	84.61	200.86	130.84	139.09
13	E1a_E3a	NovelJunction	1	7.06	3.89	3.08	13.11	0.00	17.69	1.55
14	I1_AR1	ActiveIntronRegion	0	85.02	119.31	85.49	62.58	21.71	85.79	16.67
15	I1_AR2	ActiveIntronRegion	1	69.82	72.78	61.97	30.36	19.11	29.13	15.60
16	I1_AR4	ActiveIntronRegion	0	112.00	83.73	86.80	40.95	37.30	57.94	25.58
17	ER2a	ExonRegion	0	1447.97	495.27	906.52	301.83	522.44	474.55	360.39
18	E2_Da	NovelBoundary	0	79.68	101.54	44.88	38.93	33.47	53.41	39.73
19	E2a_E3a	KnownJunction	0	2574.07	414.01	1442.62	356.87	1242.50	514.53	528.43
20	E3_Aa	NovelBoundary	1	99.36	107.95	46.60	29.96	90.97	45.29	36.50
21	ER3a	ExonRegion	0	2798.05	637.90	1583.11	507.97	836.67	779.50	459.87
22	E3a_E4a	KnownJunction	0	2389.15	488.18	1496.17	352.29	958.74	674.07	415.53
23	ER4a	ExonRegion	0	1293.37	436.09	997.39	306.25	540.97	512.37	347.27
24	E4_Da	NovelBoundary	0	49.55	155.11	37.65	93.41	17.43	99.86	14.37
25	E4a_E5a	KnownJunction	0	877.22	284.34	753.77	224.23	336.29	360.51	325.09
26	I4_AR1	ActiveIntronRegion	0	81.67	94.13	37.60	63.93	42.51	59.52	11.15
27	I4_SR5	SilentIntronRegion	1	47.28	78.86	27.47	24.19	34.22	27.96	12.62
28	ER5a	ExonRegion	0	1112.79	423.77	803.61	275.00	583.35	462.98	340.52
29	E5a_E6a	KnownJunction	0	1537.63	447.24	959.65	310.73	923.96	560.09	367.76
30	ER6a	ExonRegion	0	1172.90	382.93	775.83	223.24	420.33	430.08	271.52
31	IG26	Intergenic	0	44.37	22.09	59.90	22.35	37.22	36.16	58.15
32	IG26_SR1	SilentIntergenicRegion	0	17.12	5.72	10.10	0.00	1.76	4.07	4.10
33	IG26_SR2	SilentIntergenicRegion	0	22.05	6.71	12.83	1.64	2.48	5.38	4.43
34	IG26_SR3	SilentIntergenicRegion	0	14.77	13.07	8.64	5.49	3.85	7.03	3.63
35	IG26_SR4	SilentIntergenicRegion	0	12.59	10.10	7.42	2.82	1.77	10.89	3.87
36	IG26_AR4	ActiveIntergenicRegion	0	50.51	24.81	71.25	26.58	45.43	42.87	71.40
37	IG26_SR5	SilentIntergenicRegion	0	80.23	26.49	100.04	33.14	41.35	53.09	70.25
38	IG26_AR5	ActiveIntergenicRegion	0	34.90	7.17	50.94	15.94	40.99	16.85	30.72