Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 HTRA3 Gene 0 0.01 0.11 0.84 1.96 9.94 37.10 0.04 2 382512 Transcript 0 0.00 0.00 0.00 0.00 2.32 1.76 0.00 3 307358 Transcript 0 0.01 0.04 1.01 1.90 12.56 49.80 0.00 4 IG49_SR1 SilentIntergenicRegion 0 0.47 0.00 0.21 5.32 0.00 0.75 18.24 5 IG49_AR1 ActiveIntergenicRegion 0 0.40 0.31 0.53 7.41 0.00 0.00 29.81 6 IG49_AR2 ActiveIntergenicRegion 0 0.41 0.00 0.10 6.78 0.00 0.59 14.78 7 ER1a ExonRegion 0 0.00 0.00 0.00 0.27 1.93 16.85 0.00 8 E1a_E2a KnownJunction 0 0.00 0.00 0.00 1.49 8.44 36.55 0.00 9 ER2a ExonRegion 0 0.00 0.00 0.68 0.30 17.93 37.83 0.40 10 E2a_E3a KnownJunction 0 0.00 0.00 1.64 0.00 13.35 51.29 0.67 11 ER3a ExonRegion 0 0.00 0.00 1.39 2.53 17.88 54.64 0.27 12 E3a_E4a KnownJunction 0 0.00 0.00 0.85 3.28 28.03 65.95 0.00 13 ER4a ExonRegion 0 0.00 0.00 1.85 4.50 19.37 61.12 0.00 14 E4a_E5a KnownJunction 0 0.00 0.00 3.41 6.18 14.80 43.71 0.00 15 ER5a ExonRegion 0 0.00 0.00 4.19 5.40 24.00 46.81 0.00 16 E5a_E6a KnownJunction 0 0.00 0.00 2.62 3.17 26.26 35.91 0.00 17 ER6a ExonRegion 0 0.00 0.00 1.27 2.73 24.68 59.94 0.00 18 E6a_E8a KnownJunction 0 0.00 0.00 1.48 2.71 17.43 51.08 0.00 19 ER7a ExonRegion 0 0.00 0.00 0.00 0.00 2.32 1.76 0.00 20 I7_AR1 ActiveIntronRegion 0 0.00 0.00 0.24 0.76 6.09 15.73 0.00 21 ER8a ExonRegion 0 0.00 0.00 1.02 1.96 14.45 47.24 0.00 22 E8a_E9a KnownJunction 0 0.00 0.00 1.37 1.68 13.30 48.00 0.00 23 ER9a ExonRegion 0 0.00 0.00 0.42 1.18 12.01 50.57 0.00 24 E9a_E10a KnownJunction 0 0.00 0.00 0.86 1.52 10.07 65.36 0.00 25 ER10a ExonRegion 0 0.03 0.24 0.91 2.35 8.10 36.52 0.00 26 IG50_AR1 ActiveIntergenicRegion 0 14.86 6.90 20.03 12.91 10.32 4.29 9.42 27 IG50_AR2 ActiveIntergenicRegion 0 17.38 6.07 25.97 18.35 7.67 3.97 9.09 28 IG50_SR2 SilentIntergenicRegion 0 8.46 4.29 10.17 7.10 2.15 0.74 5.97 29 IG50_AR3 ActiveIntergenicRegion 0 45.26 12.44 31.47 25.92 5.10 5.71 7.17 30 IG50_SR3 SilentIntergenicRegion 0 10.26 8.55 13.99 17.32 1.38 1.45 7.10