Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RPL9	Gene	0	663.76	3499.08	871.49	3247.19	31.10	3767.27	901.36
2	295955	Transcript	0	858.37	3224.41	1130.91	3066.92	362.99	3543.47	1218.86
3	ER1a	ExonRegion	0	45.86	79.93	93.24	145.67	129.20	64.98	66.61
4	E1a_E2a	KnownJunction	0	170.79	289.09	311.12	472.71	995.47	257.20	253.14
5	I1	Intron	0	61.89	198.86	94.58	214.56	136.00	133.36	95.80
6	I1_AR1	ActiveIntronRegion	0	62.16	199.62	94.98	215.44	136.58	133.89	96.21
7	E2_Aa	NovelBoundary	0	100.49	719.31	159.38	743.57	143.96	557.60	212.91
8	ER2a	ExonRegion	0	48.59	97.03	96.42	167.97	60.29	76.92	71.19
9	E2a_E3a	KnownJunction	0	190.27	450.42	254.24	545.86	13.12	438.07	283.22
10	ER3a	ExonRegion	0	109.84	149.83	148.81	260.29	6.05	184.66	143.86
11	E3a_E4a	KnownJunction	0	1548.56	919.71	1958.86	1262.82	1951.01	1293.06	1679.67
12	ER4a	ExonRegion	0	1220.67	3660.26	1551.53	3967.25	145.37	4435.36	1541.73
13	E4_Da	NovelBoundary	0	29.19	58.74	39.19	69.49	21.78	29.94	13.20
14	E4a_E5a	KnownJunction	0	900.51	6953.10	1367.51	5943.46	172.83	6704.01	2064.50
15	E4a_E6a	NovelJunction	0	3.49	73.32	0.00	119.15	2.07	95.17	1.78
16	I4	Intron	0	28.21	44.17	32.77	48.66	16.93	47.85	21.80
17	I4_AR1	ActiveIntronRegion	0	28.27	44.26	32.83	48.76	16.96	47.95	21.84
18	ER5a	ExonRegion	0	1568.11	10071.96	2026.25	8566.74	1.10	9878.84	2106.29
19	E5_Da	NovelBoundary	0	56.88	61.03	132.42	70.38	32.99	73.83	42.85
20	E5a_E6a	KnownJunction	0	4409.18	11653.51	5038.74	10724.66	606.15	12783.06	5139.18
21	E5a_E7a	NovelJunction	1	10.43	61.66	30.06	113.08	0.00	138.88	2.02
22	I5	Intron	0	52.28	45.13	98.81	50.66	40.24	54.07	35.71
23	I5_AR1	ActiveIntronRegion	0	70.67	51.93	132.72	62.44	52.05	63.44	49.59
24	I5_AR2	ActiveIntronRegion	0	40.62	54.87	75.68	47.68	30.75	65.79	23.09
25	E6_Aa	NovelBoundary	0	84.82	134.27	110.39	142.20	35.13	173.31	41.99
26	ER6a	ExonRegion	0	727.82	6856.50	969.30	5755.58	0.00	6941.01	1139.05
27	E6_Da	NovelBoundary	0	43.03	42.45	59.31	48.01	12.86	63.73	11.79
28	E6a_E7a	KnownJunction	0	1221.04	4728.57	2140.98	5074.43	767.48	6383.41	2504.75
29	ER7a	ExonRegion	0	597.42	1839.55	821.65	2343.34	0.35	2952.85	802.42
30	E7a_E8a	KnownJunction	1	108.22	598.04	166.80	714.28	596.03	713.84	438.11
31	ER8a	ExonRegion	0	8.64	18.67	18.21	58.71	0.47	44.78	49.18
32	IG27	Intergenic	0	4.39	2.84	4.47	3.17	9.72	2.20	2.18
33	IG27_AR3	ActiveIntergenicRegion	0	9.66	4.77	11.66	5.10	30.71	5.42	5.35