Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ADD1	Gene	0	158.63	162.11	209.63	164.66	241.31	123.63	265.54
2	264758	Transcript	0	0	0	0	0	0	0	0
3	398124	Transcript	0	0	0	0	0	0	0	0
4	398125	Transcript	0	0	0	0	0	0	0	0
5	355842	Transcript	0	2.34	0.60	2.38	1.56	1.17	0.57	1.57
6	398129	Transcript	0	2.85	5.90	7.02	6.41	8.33	4.73	10.41
7	398123	Transcript	0	0	0	0	0	0	0	0
8	ER1a	ExonRegion	0	28.51	41.80	36.68	47.00	47.48	25.64	58.77
9	E1a_E4a	KnownJunction	0	27.94	66.76	51.46	59.93	60.93	59.31	60.81
10	ER2a	ExonRegion	0	3.97	0.40	0.99	0.42	1.57	0.54	1.27
11	E2a_E3a	KnownJunction	0	0.00	0.00	0.60	0.00	0.00	0.00	0.00
12	ER3a	ExonRegion	0	4.04	0.72	3.58	1.66	1.95	1.75	2.97
13	E3a_E4a	KnownJunction	0	1.37	1.29	4.33	4.17	1.18	0.00	2.05
14	E4_Ab	NovelBoundary	1	26.44	90.24	53.87	88.29	33.59	59.68	71.90
15	ER4a	ExonRegion	0	30.17	89.26	63.07	93.85	55.71	71.82	86.63
16	ER4b	ExonRegion	0	134.12	172.95	196.17	155.88	185.29	120.47	219.41
17	E4a_E5a	KnownJunction	0	185.33	257.59	253.22	204.78	366.17	201.27	285.87
18	ER5a	ExonRegion	0	314.03	312.47	421.83	273.89	367.69	220.54	419.85
19	E5a_E6a	KnownJunction	0	299.98	333.31	425.56	264.35	445.13	214.59	452.49
20	ER6a	ExonRegion	0	376.76	322.41	493.38	292.31	528.28	202.22	504.74
21	E6a_E7a	KnownJunction	0	381.01	306.11	483.26	274.60	447.80	172.30	512.68
22	ER7a	ExonRegion	0	322.05	330.46	439.98	315.45	425.72	186.46	447.76
23	E7a_E8a	KnownJunction	0	308.06	295.90	426.54	299.41	328.66	196.95	418.13
24	ER8a	ExonRegion	0	300.94	275.70	404.67	230.49	415.70	162.17	408.79
25	E8a_E9a	KnownJunction	0	190.52	183.58	269.46	149.95	310.25	105.62	283.56
26	ER9a	ExonRegion	0	157.12	177.61	249.75	131.37	242.08	122.36	268.97
27	E9a_E10a	KnownJunction	0	133.15	196.88	262.22	125.24	309.95	120.36	289.78
28	ER10a	ExonRegion	0	171.14	174.51	287.31	160.64	309.47	119.45	320.17
29	E10a_E11a	KnownJunction	0	190.20	169.29	296.45	169.40	251.81	113.10	319.58
30	ER11a	ExonRegion	0	187.12	214.93	315.08	218.68	319.19	157.25	357.95
31	E11a_E12a	KnownJunction	0	203.25	241.49	328.53	260.70	446.00	186.63	406.70
32	I11_AR2	ActiveIntronRegion	0	29.35	8.17	42.57	1.54	10.59	2.83	8.69
33	ER12a	ExonRegion	0	225.93	253.99	348.98	245.39	387.32	171.63	415.66
34	E12_Da	KnownBoundary	0	65.86	70.04	81.88	68.16	74.25	48.19	122.78
35	E12a_E13a	KnownJunction	0	205.15	184.37	288.36	194.92	438.28	124.81	379.84
36	ER12b	ExonRegion	0	39.94	58.22	60.30	52.37	58.03	31.76	96.21
37	E12b_E13a	KnownJunction	1	18.29	35.39	37.72	37.82	26.46	24.17	70.94
38	I12	Intron	0	35.88	19.74	38.21	18.54	18.27	10.67	19.17
39	I12_AR1	ActiveIntronRegion	0	35.90	19.75	38.24	18.56	18.28	10.68	19.18
40	ER13a	ExonRegion	0	254.21	285.09	410.28	270.60	426.06	191.76	559.42
41	E13a_E14a	KnownJunction	0	242.49	315.23	367.32	300.06	406.77	236.03	542.29
42	ER14a	ExonRegion	0	229.70	258.10	350.06	277.96	374.71	187.41	506.01
43	E14a_E15a	KnownJunction	0	5.62	10.82	16.61	25.11	6.57	20.05	0.89
44	E14a_E16a	KnownJunction	0	211.21	197.88	336.06	218.95	338.09	140.75	541.79
45	ER15a	ExonRegion	0	14.01	16.20	16.18	27.50	9.46	30.86	3.43
46	E15a_E16a	KnownJunction	1	20.90	9.64	9.27	36.90	4.31	19.78	2.28
47	ER16a	ExonRegion	0	188.43	234.19	282.87	251.39	368.70	168.50	472.73
48	E16a_E17a	KnownJunction	0	208.14	260.64	323.36	263.73	320.76	144.61	510.41
49	E17_Aa	NovelBoundary	1	98.75	3.05	134.87	2.84	73.93	2.09	3.73
50	ER17a	ExonRegion	0	192.31	223.06	262.72	242.97	252.19	136.02	421.51
51	E17a_E18a	KnownJunction	1	23.95	23.91	14.10	19.34	93.25	7.37	10.26
52	E17a_E19a	KnownJunction	0	97.10	185.77	153.60	189.83	103.25	125.26	314.46
53	ER18a	ExonRegion	0	23.51	28.05	18.69	28.72	90.30	8.87	14.13
54	E18a_E19a	KnownJunction	1	20.11	26.19	15.19	30.37	78.66	9.46	14.62
55	ER19a	ExonRegion	0	131.21	142.39	169.89	162.79	200.15	125.86	259.43
56	E19_Da	KnownBoundary	0	150.69	201.06	173.56	215.92	122.34	189.85	342.03
57	ER19b	ExonRegion	0	197.98	187.43	224.47	207.42	304.02	167.08	309.22
58	ER19c	ExonRegion	0	10.76	20.05	22.69	19.33	24.70	18.39	22.26
59	ER19d	ExonRegion	0	2.85	5.90	7.02	6.41	8.33	4.73	10.41