Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC024937.21	Gene	0	24.01	25.20	24.49	26.25	17.85	24.43	23.91
2	354937	Transcript	0	16.26	21.55	18.20	21.31	12.02	21.02	19.43
3	ER1a	ExonRegion	0	7.75	10.82	10.06	14.35	10.94	6.37	15.99
4	E1a_E2a	KnownJunction	1	8.83	10.85	16.24	18.04	5.56	8.98	26.87
5	E1a_E4a	NovelJunction	0	0.00	9.62	0.00	3.25	0.00	5.63	0.00
6	I1	Intron	0	8.31	7.40	11.61	4.44	3.00	3.96	4.76
7	I1_AR2	ActiveIntronRegion	1	3.07	13.36	19.42	4.99	3.10	8.58	8.66
8	I1_SR2	SilentIntronRegion	0	13.69	9.42	18.19	4.54	4.78	4.91	6.61
9	I1_AR3	ActiveIntronRegion	0	11.58	3.94	16.51	3.92	2.11	0.43	4.02
10	I1_SR3	SilentIntronRegion	0	8.45	1.15	9.08	2.22	1.55	3.79	3.83
11	I1_AR4	ActiveIntronRegion	0	10.80	12.22	14.34	9.09	5.49	9.13	6.24
12	ER2a	ExonRegion	0	14.63	35.54	27.51	22.54	10.85	33.15	25.53
13	E2_Da	NovelBoundary	1	12.12	53.96	17.65	16.36	10.40	30.31	16.60
14	E2a_E3a	KnownJunction	0	16.29	66.23	33.81	41.56	19.83	52.13	21.97
15	E3_Aa	NovelBoundary	0	19.53	52.25	24.24	46.98	4.40	42.50	24.42
16	ER3a	ExonRegion	0	22.54	80.55	37.32	59.36	12.39	65.35	46.40
17	E3a_E4a	KnownJunction	0	15.87	47.31	26.24	54.56	19.02	44.78	43.12
18	ER4a	ExonRegion	0	12.82	47.33	13.61	40.77	3.46	45.10	32.68
19	E4_Da	NovelBoundary	0	13.32	17.42	9.51	8.51	3.37	16.16	11.42
20	E4a_E5a	KnownJunction	0	14.77	28.32	14.26	20.67	0.00	32.37	21.01
21	E5_Aa	NovelBoundary	0	3.10	11.03	6.68	6.31	4.29	15.38	5.04
22	ER5a	ExonRegion	1	6.45	24.69	9.32	12.98	16.10	24.81	18.84
23	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER6a	ExonRegion	0	1.43	6.72	3.48	3.67	10.97	5.44	5.04
25	E6_Da	NovelBoundary	1	20.90	45.42	26.77	24.52	52.40	19.05	23.13
26	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER7a	ExonRegion	0	0.10	0.15	0.08	0.00	0.10	0.00	0.00
29	E8_Aa	NovelBoundary	0	128.66	161.86	130.87	208.98	177.18	207.19	187.20
30	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER9a	ExonRegion	0	0.37	0.65	0.37	0.31	1.87	0.89	0.08
33	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER10a	ExonRegion	0	9.21	16.05	8.80	19.79	7.03	15.96	13.09
35	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER11a	ExonRegion	0	32.18	36.55	31.08	43.63	30.13	33.85	29.89
37	E11_Da	NovelBoundary	1	16.32	11.51	15.28	20.37	12.29	5.95	14.17
38	E11a_E12a	KnownJunction	0	38.05	21.41	40.62	32.21	22.11	20.77	30.90
39	E12_Aa	NovelBoundary	1	14.22	5.99	17.76	19.61	3.39	17.47	15.05
40	ER12a	ExonRegion	0	35.38	26.30	35.59	35.78	8.53	24.98	28.99
41	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER13a	ExonRegion	0	72.84	36.31	73.12	39.72	29.53	28.88	43.41
43	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	ER14a	ExonRegion	1	56.40	10.67	53.17	30.48	36.61	18.98	29.83
45	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	ER15a	ExonRegion	0	30.48	27.14	25.91	32.82	25.87	36.17	33.54
47	E15a_E16a	KnownJunction	0	15.66	36.49	32.79	40.01	30.68	50.38	38.08
48	E16_Aa	NovelBoundary	0	11.65	10.19	8.81	11.81	4.36	9.65	10.55
49	ER16a	ExonRegion	0	44.14	63.34	46.25	58.94	36.32	53.95	46.73
50	E16_Da	NovelBoundary	0	17.62	11.17	10.78	12.43	8.69	5.63	10.88
51	E16a_E17a	KnownJunction	0	54.28	45.21	36.23	52.88	28.22	55.56	52.73
52	I16	Intron	1	5.23	7.51	3.05	3.43	6.66	2.03	9.28
53	I16_AR1	ActiveIntronRegion	1	5.87	8.50	3.41	3.89	6.98	2.30	10.51
54	E17_Aa	NovelBoundary	0	23.72	6.54	21.37	6.77	26.95	13.19	25.67
55	ER17a	ExonRegion	0	26.07	32.51	24.67	27.99	30.57	34.88	36.37