Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	KCNAB1	Gene	0	9.22	6.98	19.22	19.41	9.41	8.75	5.31
2	389636	Transcript	0	0.00	0.17	0.19	0.17	0.00	0.00	0.00
3	389634	Transcript	0	0.00	0.00	0.00	0.00	0.00	1.58	0.00
4	320719	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	302490	Transcript	0	0	0	0	0	0	0	0
6	389632	Transcript	0	0.00	0.00	0.00	0.03	0.02	0.10	0.00
7	ER1a	ExonRegion	0	0.00	0.34	0.37	0.34	0.00	0.00	0.00
8	E1a_E6b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.24	0.00
10	E2a_E6b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	2.92	0.00
11	ER3a	ExonRegion	0	0.00	0.00	0.05	0.25	0.09	0.20	0.00
12	E3_Ab	KnownBoundary	0	0.00	0.00	0.00	5.04	0.00	0.00	0.00
13	ER3b	ExonRegion	0	0.00	0.00	0.47	2.22	0.27	2.08	0.00
14	E3a_E6b	KnownJunction	0	0.00	0.00	0.00	1.65	1.18	0.99	0.00
15	ER3c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER6a	ExonRegion	0	0.00	0.00	0.00	0.21	0.13	0.61	0.00
21	ER6b	ExonRegion	0	0.00	1.10	0.00	0.84	0.72	2.71	0.00
22	E6a_E7a	KnownJunction	0	0.00	1.63	0.00	0.00	0.97	0.00	0.00
23	ER7a	ExonRegion	0	0.00	1.18	0.00	0.00	0.87	3.00	0.00
24	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	3.32	0.00
25	ER8a	ExonRegion	0	0.43	1.11	0.00	0.94	1.28	3.13	0.00
26	E8a_E9a	KnownJunction	0	1.77	3.26	0.00	1.27	1.18	4.53	0.00
27	ER9a	ExonRegion	0	3.06	2.83	0.00	0.44	4.73	2.53	0.00
28	E9a_E10a	KnownJunction	0	2.80	1.50	0.00	0.00	10.74	0.00	0.00
29	ER10a	ExonRegion	0	1.37	1.21	0.00	0.00	8.67	0.08	0.00
30	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	7.54	0.00	0.00
31	ER11a	ExonRegion	0	1.07	0.14	0.00	0.51	8.45	0.81	0.00
32	E11a_E12a	KnownJunction	0	1.89	0.00	0.00	1.33	7.81	1.61	0.00
33	E11a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER12a	ExonRegion	0	0.79	0.00	0.88	1.75	7.67	0.70	0.00
35	E12a_E13a	KnownJunction	0	0.00	0.00	0.89	1.16	7.56	0.00	0.00
36	ER13a	ExonRegion	0	2.64	1.95	0.31	1.84	8.57	3.62	0.00
37	E13a_E14a	KnownJunction	0	4.02	1.18	0.00	1.68	9.59	3.70	0.00
38	ER14a	ExonRegion	0	3.44	1.41	1.27	1.16	12.99	3.31	0.00
39	E14a_E15a	KnownJunction	0	1.54	2.39	1.12	0.00	14.57	2.30	0.00
40	ER15a	ExonRegion	0	2.73	3.27	1.13	3.20	12.23	1.42	0.00
41	E15a_E16a	KnownJunction	0	1.99	0.00	0.00	0.00	12.73	0.00	0.00
42	I15_AR2	ActiveIntronRegion	0	3.03	7.15	5.43	27.18	6.90	19.02	2.30
43	E16_Aa	NovelBoundary	0	8.75	13.21	5.91	51.93	0.00	27.52	4.46
44	ER16a	ExonRegion	0	8.56	15.89	10.68	50.45	17.58	26.10	4.24
45	E16_Da	NovelBoundary	0	14.44	29.06	24.26	99.91	23.28	55.15	9.14
46	E16a_E17a	KnownJunction	0	1.40	0.00	0.79	0.00	12.22	1.23	0.00
47	I16	Intron	0	16.65	23.43	30.66	60.76	13.10	25.28	9.68
48	I16_AR1	ActiveIntronRegion	0	13.48	25.12	24.36	93.16	13.81	42.42	7.61
49	I16_SR1	SilentIntronRegion	0	17.21	23.15	31.79	55.11	12.98	22.29	10.05
50	E17_Aa	NovelBoundary	1	18.64	23.75	23.16	61.66	9.59	10.72	7.17
51	ER17a	ExonRegion	0	4.14	6.20	8.95	25.71	14.82	14.05	1.83
52	E17_Da	NovelBoundary	0	9.46	30.63	31.21	81.06	5.28	31.92	8.50
53	E17a_E18a	KnownJunction	0	3.19	0.00	1.39	1.60	10.35	1.61	0.00
54	I17	Intron	0	11.09	16.78	19.72	44.47	6.48	12.41	7.21
55	I17_SR1	SilentIntronRegion	0	11.56	17.79	21.22	48.83	7.28	16.03	7.03
56	I17_AR1	ActiveIntronRegion	1	6.88	14.78	17.29	32.45	3.25	4.49	7.32
57	I17_SR2	SilentIntronRegion	1	2.11	9.05	9.70	13.90	1.72	1.41	1.84
58	I17_AR2	ActiveIntronRegion	1	12.89	15.66	17.68	41.60	6.51	7.97	7.92
59	E18_Aa	NovelBoundary	0	10.63	18.52	14.59	61.42	6.55	14.42	7.44
60	ER18a	ExonRegion	0	17.94	12.95	38.54	35.95	15.84	15.36	10.67
61	IG40	Intergenic	0	35.33	43.74	65.53	126.43	50.82	66.21	38.87
62	IG40_AR1	ActiveIntergenicRegion	0	23.98	34.72	38.52	96.57	23.34	50.22	23.66
63	IG40_AR3	ActiveIntergenicRegion	0	115.65	107.86	256.77	338.52	245.06	179.80	146.53