Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC108724.4	Gene	0	7.16	3.32	8.20	4.97	25.37	2.88	24.94
2	329536	Transcript	0	9.09	4.41	10.13	3.55	25.16	3.47	30.56
3	ER1a	ExonRegion	0	1.98	1.14	3.25	1.12	5.31	2.05	9.18
4	E1a_E2a	KnownJunction	0	8.78	4.52	10.50	2.76	5.56	0.00	21.33
5	I1_AR1	ActiveIntronRegion	0	4.19	3.42	4.91	4.83	7.06	1.71	11.75
6	ER2a	ExonRegion	0	7.54	2.04	9.62	5.52	18.32	1.75	21.69
7	E2a_E3a	KnownJunction	0	5.26	0.00	13.12	5.23	16.41	7.75	25.75
8	ER3a	ExonRegion	0	8.21	3.42	8.72	8.98	26.15	2.92	26.12
9	E3_Da	NovelBoundary	0	1.03	6.23	1.44	9.70	1.04	0.00	0.00
10	E3a_E4a	KnownJunction	0	26.09	8.85	19.33	5.69	48.73	3.06	64.55
11	ER4a	ExonRegion	0	13.28	6.43	16.84	2.67	44.96	4.06	50.38
12	E4_Da	NovelBoundary	0	3.79	1.26	2.16	11.62	4.31	0.00	1.73
13	E4a_E5a	KnownJunction	0	5.92	9.09	7.01	0.00	18.33	5.87	36.27
14	I4	Intron	0	5.08	1.80	4.71	3.26	13.95	0.80	4.73
15	I4_AR1	ActiveIntronRegion	0	3.29	3.89	3.30	8.57	5.59	0.00	1.90
16	I4_AR2	ActiveIntronRegion	0	11.47	4.31	10.15	2.23	27.07	1.19	7.68
17	I4_SR2	SilentIntronRegion	0	12.23	7.29	13.73	3.74	38.36	2.45	10.24
18	I4_AR3	ActiveIntronRegion	0	11.57	6.41	9.07	4.30	37.97	1.36	10.08
19	I4_AR4	ActiveIntronRegion	0	9.85	1.50	7.74	5.61	26.34	1.82	10.43
20	I4_SR5	SilentIntronRegion	0	8.23	2.80	9.56	2.44	34.92	2.02	8.85
21	E5_Aa	NovelBoundary	0	4.91	1.63	8.82	1.60	24.64	0.00	6.25
22	ER5a	ExonRegion	0	4.75	4.22	2.79	0.00	42.65	3.81	19.78
23	IG2	Intergenic	0	4.43	11.47	6.47	17.60	4.55	2.81	5.41
24	IG2_SR17	SilentIntergenicRegion	0	3.08	2.19	3.75	2.09	14.10	0.38	9.17
25	IG2_AR17	ActiveIntergenicRegion	0	2.81	1.19	3.90	1.07	9.78	0.00	3.27
26	IG2_AR14	ActiveIntergenicRegion	0	27.56	76.64	29.93	111.26	3.86	12.88	33.03
27	IG2_AR13	ActiveIntergenicRegion	0	28.96	103.58	35.74	145.05	7.87	25.17	41.09
28	IG2_SR13	SilentIntergenicRegion	0	22.90	76.60	30.18	124.16	5.20	20.15	44.21
29	IG2_AR12	ActiveIntergenicRegion	0	16.83	37.56	21.52	49.42	5.04	7.74	20.73
30	IG2_SR12	SilentIntergenicRegion	0	20.37	39.65	20.02	50.26	9.45	5.51	22.32
31	IG2_AR11	ActiveIntergenicRegion	0	11.23	27.94	14.72	24.74	4.93	1.73	16.00
32	IG2_SR11	SilentIntergenicRegion	0	12.90	21.31	17.60	32.31	5.99	4.79	12.30
33	IG2_AR5	ActiveIntergenicRegion	0	9.47	75.73	8.47	68.32	1.72	11.26	9.31
34	IG2_AR2	ActiveIntergenicRegion	0	0.89	5.05	4.16	17.98	1.03	3.77	2.06
35	IG2_AR1	ActiveIntergenicRegion	0	3.50	22.59	21.51	64.67	2.08	13.58	0.46