Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	IFT57	Gene	0	112.55	269.53	137.66	245.50	76.94	289.70	63.72
2	264538	Transcript	0	263.85	597.11	317.97	558.21	190.29	641.21	142.83
3	ER1a	ExonRegion	0	93.26	317.72	101.91	254.73	51.99	280.97	53.20
4	E1a_E2a	KnownJunction	0	146.45	638.53	183.61	444.48	166.07	543.79	64.74
5	E1a_E3a	NovelJunction	0	5.96	10.67	10.32	26.14	2.17	21.90	0.00
6	ER2a	ExonRegion	0	182.11	714.07	235.65	528.87	90.44	627.88	112.15
7	E2a_E3a	KnownJunction	0	213.30	673.94	298.62	536.16	114.66	619.21	124.04
8	ER3a	ExonRegion	0	280.34	769.74	357.39	622.63	167.31	741.51	143.52
9	E3a_E4a	KnownJunction	0	341.48	690.28	414.27	619.82	165.10	764.84	143.31
10	ER4a	ExonRegion	0	377.62	709.17	481.05	678.77	225.49	814.76	182.38
11	E4a_E5a	KnownJunction	0	469.77	733.18	557.47	772.02	305.61	887.53	198.13
12	E4a_E6a	NovelJunction	1	0.00	13.63	0.00	2.28	0.00	8.50	0.00
13	ER5a	ExonRegion	0	499.47	768.19	539.54	770.69	268.51	919.07	202.05
14	E5a_E6a	KnownJunction	0	417.38	741.54	471.05	709.33	250.58	868.50	175.63
15	ER6a	ExonRegion	0	393.23	716.26	462.81	669.44	244.46	727.98	200.37
16	E6a_E7a	KnownJunction	0	376.31	689.31	382.09	606.54	310.52	683.53	170.24
17	ER7a	ExonRegion	0	272.36	627.07	333.90	575.80	224.07	623.20	166.04
18	E7a_E8a	KnownJunction	0	230.65	615.07	323.48	620.33	182.92	600.85	180.52
19	I7_AR1	ActiveIntronRegion	1	27.49	13.36	21.31	9.65	1.67	10.80	2.02
20	E8_Aa	NovelBoundary	1	48.77	25.38	36.20	13.09	2.81	32.53	4.79
21	ER8a	ExonRegion	0	212.01	551.44	279.15	536.05	203.94	583.45	154.49
22	E8a_E9a	KnownJunction	0	185.21	518.39	224.68	531.55	202.87	570.89	114.01
23	ER9a	ExonRegion	0	181.11	490.20	224.73	505.00	204.89	537.06	133.30
24	E9_Da	NovelBoundary	1	31.01	22.07	21.41	24.82	3.25	7.64	4.61
25	E9a_E10a	KnownJunction	0	157.70	428.15	202.10	463.66	215.20	524.42	134.31
26	I9	Intron	1	32.21	21.90	31.38	23.81	2.49	21.88	2.68
27	I9_AR1	ActiveIntronRegion	1	45.57	22.71	37.38	23.76	3.43	22.63	2.03
28	I9_SR1	SilentIntronRegion	0	27.80	26.05	33.14	30.33	2.38	21.94	3.42
29	I9_AR2	ActiveIntronRegion	1	29.32	19.81	28.48	21.01	2.21	21.63	2.59
30	E10_Aa	NovelBoundary	1	36.35	22.57	25.36	34.60	1.18	34.09	2.08
31	ER10a	ExonRegion	0	233.56	524.22	270.93	574.46	186.31	684.45	161.35
32	E10a_E11a	KnownJunction	0	245.43	553.67	291.86	631.41	190.21	765.05	166.27
33	I10_AR3	ActiveIntronRegion	1	23.63	14.96	16.27	23.36	0.16	26.14	1.37
34	ER11a	ExonRegion	0	32.19	69.16	41.13	70.74	24.96	96.38	19.36
35	IG25_SR11	SilentIntergenicRegion	0	3.08	7.74	0.00	0.57	0.00	1.68	0.00
36	IG25_AR11	ActiveIntergenicRegion	0	0.88	10.30	0.00	1.32	0.00	0.00	0.26