Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 IHPK2 Gene 0 192.37 280.77 231.75 324.68 187.51 327.91 182.95 2 340879 Transcript 1 147.08 147.11 205.52 194.33 61.64 124.44 72.97 3 328631 Transcript 0 0 0 0 0 0 0 0 4 395507 Transcript 0 78.38 101.14 88.57 116.59 122.69 74.48 89.38 5 395509 Transcript 0 7.74 4.90 14.24 7.94 5.81 5.58 1.83 6 IG42_AR10 ActiveIntergenicRegion 0 65.96 16.77 61.42 35.07 71.56 32.01 89.11 7 IG42_AR9 ActiveIntergenicRegion 0 117.92 35.90 119.95 75.56 155.70 83.63 150.14 8 ER1a ExonRegion 0 94.31 114.34 111.53 139.40 156.27 85.76 97.95 9 E1a_E2b KnownJunction 0 259.03 331.55 313.96 359.15 345.05 213.81 303.47 10 E1a_E2c NovelJunction 0 111.14 153.19 125.02 207.27 116.62 112.85 128.50 11 I1_AR2 ActiveIntronRegion 1 43.94 40.22 54.28 61.28 14.83 48.05 8.99 12 I1_SR6 SilentIntronRegion 0 64.49 17.36 47.48 12.14 23.20 6.19 15.76 13 I1_AR8 ActiveIntronRegion 1 114.98 29.37 69.40 31.52 25.21 24.43 14.39 14 I1_SR7 SilentIntronRegion 1 56.58 18.20 46.59 21.01 9.91 11.90 7.96 15 I1_AR9 ActiveIntronRegion 1 54.26 20.70 34.37 14.10 8.26 47.33 8.18 16 E2_Ac NovelBoundary 1 58.63 10.61 50.87 8.07 2.24 26.91 8.73 17 ER2a ExonRegion 0 78.38 101.14 88.57 116.59 122.69 74.48 89.38 18 ER2b ExonRegion 0 293.54 394.83 329.21 438.93 453.52 275.85 346.07 19 ER2c ExonRegion 0 276.38 450.46 350.98 500.89 272.81 531.73 256.75 20 E2_Da NovelBoundary 1 67.61 116.12 125.05 98.75 25.31 31.41 15.52 21 E2a_E3a KnownJunction 1 110.42 143.34 97.20 169.89 29.44 127.38 49.07 22 E2a_E4a KnownJunction 0 0.00 1.63 0.53 1.68 1.01 0.00 0.00 23 E2a_E5a KnownJunction 0 182.39 326.48 151.09 304.29 109.96 514.39 185.28 24 I2 Intron 1 121.74 48.48 232.89 70.03 32.83 21.33 19.05 25 I2_AR1 ActiveIntronRegion 1 122.03 48.59 233.45 70.18 32.91 21.37 19.10 26 E3_Aa NovelBoundary 1 222.68 66.31 407.99 78.62 62.24 21.17 23.98 27 ER3a ExonRegion 1 183.73 150.88 313.84 218.77 93.85 121.50 96.86 28 E3_Da NovelBoundary 1 56.48 24.35 110.26 27.01 22.52 21.44 16.22 29 I3 Intron 1 24.93 8.06 55.15 18.96 14.78 7.31 5.83 30 I3_AR1 ActiveIntronRegion 1 25.27 8.16 56.00 19.24 15.00 7.41 5.93 31 E4_Aa NovelBoundary 1 64.14 47.31 84.34 43.91 25.24 25.81 19.71 32 ER4a ExonRegion 0 17.89 6.39 28.56 9.69 11.42 8.90 2.38 33 E4_Da NovelBoundary 1 54.88 27.35 90.63 49.63 13.05 24.41 16.19 34 E4a_E5a KnownJunction 0 12.67 10.72 27.19 18.50 9.96 10.75 4.70 35 E5_Aa NovelBoundary 1 56.51 37.38 75.50 41.26 3.32 15.03 16.78 36 ER5a ExonRegion 0 303.34 420.48 299.41 436.43 246.27 634.50 269.27 37 E5a_E6a KnownJunction 0 234.31 312.79 252.43 347.47 262.43 461.87 213.85 38 ER6a ExonRegion 0 231.53 344.04 244.22 360.46 305.51 452.28 279.95 39 E6a_E7a KnownJunction 0 184.47 358.71 196.86 344.00 330.51 421.69 255.46 40 ER7a ExonRegion 0 214.25 411.63 174.32 461.05 308.30 468.07 304.52 41 E7a_E8a KnownJunction 0 146.00 454.08 133.87 483.60 241.82 452.57 286.10 42 ER8a ExonRegion 0 153.93 312.44 129.25 349.83 199.63 375.28 197.54 43 ER8b ExonRegion 0 0.41 0.86 0.68 1.91 0.86 2.67 0.24