Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SEMA3B	Gene	0	35.48	203.27	3.13	19.01	6.59	45.91	31.12
2	13808	Transcript	0	12.22	51.80	0.79	5.83	2.69	23.13	8.08
3	316347	Transcript	0	36.98	177.98	2.56	17.45	3.94	34.11	33.68
4	IG25_AR3	ActiveIntergenicRegion	0	7.31	7.87	4.25	7.68	2.26	9.86	5.81
5	IG25_AR4	ActiveIntergenicRegion	0	11.32	11.23	3.84	7.25	3.62	10.09	9.96
6	IG25_SR4	SilentIntergenicRegion	0	3.27	5.19	1.16	5.98	2.10	4.36	8.13
7	IG25_AR5	ActiveIntergenicRegion	0	4.42	5.71	1.52	5.56	0.70	3.18	7.49
8	ER1a	ExonRegion	1	3.63	4.13	0.32	2.65	2.47	15.29	2.82
9	E1a_E2a	KnownJunction	1	4.06	5.10	0.00	1.68	2.05	28.60	1.22
10	I1	Intron	1	4.65	3.70	1.80	3.94	1.19	4.55	8.46
11	I1_SR1	SilentIntronRegion	1	4.74	3.83	2.02	4.67	1.40	4.81	8.99
12	ER2a	ExonRegion	1	14.86	82.58	1.20	10.84	4.46	36.25	11.00
13	E2_Ab	KnownBoundary	0	16.79	111.26	3.00	12.95	1.18	50.09	19.38
14	ER2b	ExonRegion	0	8.04	76.46	0.71	12.76	2.41	31.33	6.41
15	E2_Da	NovelBoundary	0	3.71	87.64	1.41	12.95	1.11	27.84	2.41
16	E2b_E3a	KnownJunction	1	12.88	167.30	1.70	5.93	5.12	35.88	7.35
17	ER2c	ExonRegion	0	4.61	89.09	0.00	7.48	1.08	26.56	2.25
18	ER2d	ExonRegion	0	7.97	134.31	0.00	8.59	2.88	35.19	4.65
19	ER3a	ExonRegion	0	33.58	224.05	3.10	19.72	6.62	54.15	26.93
20	E3_Da	NovelBoundary	1	6.23	52.07	0.53	10.02	2.14	9.54	4.08
21	E3a_E4a	KnownJunction	1	28.72	240.46	2.33	8.48	4.03	59.39	18.22
22	ER4a	ExonRegion	0	33.30	243.63	2.47	14.55	5.98	68.15	23.99
23	E4a_E5a	KnownJunction	0	40.61	270.23	3.12	19.13	7.40	63.70	34.48
24	E5_Aa	NovelBoundary	1	4.99	48.84	3.06	4.80	2.14	1.26	13.64
25	ER5a	ExonRegion	0	39.80	282.13	3.64	22.10	9.48	62.16	42.36
26	E5a_E6a	KnownJunction	0	43.48	263.61	3.56	14.25	10.33	69.36	29.81
27	ER6a	ExonRegion	0	61.42	299.76	5.71	21.80	7.30	74.09	48.32
28	E6a_E7a	KnownJunction	0	51.05	325.84	5.85	22.35	5.92	77.80	53.90
29	ER7a	ExonRegion	0	52.23	367.92	6.68	38.52	8.29	80.66	49.48
30	E7_Da	NovelBoundary	0	6.74	12.45	0.76	5.45	0.00	7.80	10.26
31	E7a_E8a	KnownJunction	0	70.70	351.35	6.21	31.70	6.18	87.31	42.72
32	ER8a	ExonRegion	0	43.73	258.40	3.15	24.56	6.48	51.11	33.46
33	E8a_E9a	KnownJunction	0	19.48	182.01	0.83	14.44	5.28	42.08	26.10
34	ER9a	ExonRegion	0	26.49	175.20	1.45	15.01	4.62	38.36	27.88
35	E9_Da	NovelBoundary	0	7.16	55.35	0.63	6.69	2.19	10.99	3.81
36	E9a_E10a	KnownJunction	1	50.59	145.18	0.00	8.70	5.72	30.15	22.31
37	E9a_E11b	NovelJunction	1	1.97	13.06	0.00	1.68	3.53	0.00	0.00
38	E10_Aa	NovelBoundary	1	9.83	71.88	1.75	7.18	3.37	6.24	15.69
39	ER10a	ExonRegion	0	54.82	193.42	2.85	15.59	5.04	42.66	33.69
40	E10a_E11a	KnownJunction	0	31.44	116.78	1.65	15.93	2.24	25.75	27.47
41	E10a_E11b	KnownJunction	0	39.46	121.14	3.20	7.96	2.74	24.23	22.31
42	E11_Ab	NovelBoundary	1	21.51	47.18	1.90	12.68	2.03	11.50	11.81
43	ER11a	ExonRegion	0	44.57	157.63	2.20	18.08	3.85	34.94	34.24
44	ER11b	ExonRegion	0	62.51	281.36	4.85	25.68	6.28	52.66	46.92
45	E11_Da	NovelBoundary	1	12.03	31.97	3.91	9.89	4.59	6.00	15.59
46	E11a_E12a	KnownJunction	0	54.44	252.15	3.20	24.35	6.45	32.78	37.91
47	I11	Intron	1	9.19	23.30	1.57	7.14	1.75	4.88	14.57
48	I11_AR1	ActiveIntronRegion	1	9.25	23.45	1.58	7.19	1.76	4.91	14.66
49	E12_Aa	NovelBoundary	0	9.83	18.34	1.88	6.20	0.92	4.05	13.01
50	ER12a	ExonRegion	0	56.44	277.93	5.57	25.30	10.58	56.61	52.99
51	E12a_E13a	KnownJunction	0	55.29	243.62	4.86	20.67	8.39	57.57	44.28
52	ER13a	ExonRegion	0	46.12	251.59	2.14	21.55	9.21	52.22	41.91
53	E13_Da	NovelBoundary	0	16.07	45.32	0.60	7.29	0.00	9.67	17.37
54	E13a_E14a	KnownJunction	0	59.17	230.40	1.22	18.91	8.58	40.90	27.14
55	ER14a	ExonRegion	0	56.64	209.62	1.95	21.32	7.40	50.15	37.78
56	E14a_E15a	KnownJunction	0	34.28	149.64	3.19	13.90	2.28	32.11	31.08
57	E14a_E16a	KnownJunction	0	6.69	8.77	0.00	4.36	3.32	7.88	8.86
58	E15_Aa	NovelBoundary	0	12.65	90.19	1.94	10.67	1.18	8.66	10.58
59	ER15a	ExonRegion	0	38.17	222.17	2.67	17.99	7.15	29.77	38.73
60	E15a_E16a	KnownJunction	0	36.42	243.69	3.10	21.37	4.17	47.97	36.87
61	ER16a	ExonRegion	0	35.09	255.84	3.76	30.35	10.69	49.22	39.85
62	E16a_E17a	KnownJunction	0	35.40	259.64	2.83	33.02	5.60	42.56	41.78
63	ER17a	ExonRegion	0	30.27	205.78	2.30	21.41	4.67	43.51	30.21
64	E17a_E18a	KnownJunction	0	26.37	174.78	3.31	21.08	8.51	44.92	42.39
65	ER18a	ExonRegion	0	27.96	164.39	3.03	16.27	6.47	39.63	24.94
66	IG26	Intergenic	0	4.77	8.46	2.02	5.62	1.68	5.74	4.20
67	IG26_AR1	ActiveIntergenicRegion	0	8.38	9.98	1.60	2.94	1.92	3.56	2.75
68	IG26_SR1	SilentIntergenicRegion	0	3.70	8.24	2.04	6.08	1.98	5.66	4.53
69	IG26_AR2	ActiveIntergenicRegion	0	5.61	9.92	2.53	7.82	1.19	11.29	6.69