Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 CACNA2D2 Gene 0 1.41 1.69 3.13 3.29 103.41 4.39 0.71 2 395083 Transcript 0 0.00 0.00 0.45 0.05 10.06 0.10 0.00 3 266039 Transcript 0 0 0 0 0 0 0 0 4 360963 Transcript 0 0.22 0.00 0.00 0.00 8.27 0.00 0.00 5 ER1a ExonRegion 0 0.00 0.24 0.06 0.00 2.20 0.21 0.00 6 E1a_E2a KnownJunction 0 0.00 0.00 0.89 0.00 24.27 2.95 0.00 7 ER2a ExonRegion 0 0.00 0.74 0.33 0.67 42.65 3.41 0.00 8 E2a_E3a KnownJunction 0 0.00 2.89 0.00 1.68 55.00 2.47 0.00 9 ER3a ExonRegion 0 0.00 2.18 0.95 3.66 72.64 5.54 0.00 10 E3a_E4a KnownJunction 0 0.00 4.02 1.18 0.00 79.49 6.14 0.00 11 ER4a ExonRegion 0 0.00 2.51 2.35 2.29 83.94 1.72 0.00 12 E4a_E5a KnownJunction 0 0.00 0.00 2.47 2.76 107.66 1.13 0.00 13 ER5a ExonRegion 0 0.00 1.24 2.88 4.99 114.93 1.09 0.00 14 E5a_E6a KnownJunction 0 0.00 1.29 2.04 4.80 102.38 1.66 0.00 15 ER6a ExonRegion 0 0.00 2.46 2.19 4.66 94.36 2.97 0.00 16 E6a_E7a KnownJunction 0 0.00 2.73 2.86 3.22 98.83 0.00 0.00 17 ER7a ExonRegion 0 0.00 1.01 2.00 3.49 84.35 2.46 0.00 18 E7a_E8a KnownJunction 0 0.00 0.00 1.58 3.01 45.55 1.53 0.00 19 ER8a ExonRegion 0 0.19 0.00 2.48 2.06 63.85 1.31 0.00 20 E8a_E9a KnownJunction 0 0.75 0.00 2.51 0.00 88.22 1.55 0.00 21 ER9a ExonRegion 0 1.10 0.00 2.19 2.79 96.91 2.74 0.00 22 E9a_E10a KnownJunction 0 0.88 0.00 2.56 4.82 109.34 3.11 0.00 23 ER10a ExonRegion 0 1.30 0.00 3.06 2.64 112.89 4.07 0.00 24 E10a_E11a KnownJunction 0 0.60 0.00 4.30 3.06 100.90 5.55 0.00 25 ER11a ExonRegion 0 1.30 1.13 4.54 3.84 150.24 4.26 0.00 26 E11a_E12a KnownJunction 0 0.85 0.00 5.49 7.23 170.87 4.31 0.00 27 ER12a ExonRegion 0 0.21 0.00 3.74 6.20 158.60 2.03 0.00 28 E12a_E13a KnownJunction 0 0.00 0.00 4.99 4.55 147.42 4.05 0.00 29 ER13a ExonRegion 0 0.41 0.03 5.68 4.94 147.03 3.37 0.00 30 E13a_E14a KnownJunction 0 1.03 0.00 5.40 5.55 157.17 1.61 0.00 31 ER14a ExonRegion 0 0.52 1.21 3.13 6.36 146.49 2.67 0.00 32 E14a_E15a KnownJunction 0 0.00 1.44 2.85 5.80 149.94 4.10 0.00 33 ER15a ExonRegion 0 0.00 1.07 3.62 4.63 139.61 3.99 0.00 34 E15a_E16a KnownJunction 0 0.00 1.37 4.57 1.25 128.70 2.89 0.00 35 ER16a ExonRegion 0 0.74 0.78 3.23 0.62 98.80 2.78 0.00 36 E16a_E17a KnownJunction 0 0.63 1.47 2.31 1.41 111.48 3.73 0.00 37 ER17a ExonRegion 0 0.07 1.72 5.27 1.61 138.56 5.59 0.00 38 E17a_E18a KnownJunction 0 0.00 3.89 6.28 2.82 135.62 6.06 0.00 39 ER18a ExonRegion 0 0.00 3.19 5.32 6.57 128.71 2.83 0.00 40 E18a_E19a KnownJunction 0 0.00 2.78 3.64 5.26 123.01 4.88 0.00 41 ER19a ExonRegion 0 0.26 2.46 3.29 4.16 117.14 4.77 0.00 42 E19a_E20a KnownJunction 0 0.92 3.55 4.27 8.83 129.53 4.64 0.00 43 ER20a ExonRegion 0 0.55 3.75 5.22 6.58 163.49 3.75 0.15 44 E20a_E21a KnownJunction 0 0.00 2.99 7.69 5.04 175.48 2.63 0.67 45 ER21a ExonRegion 0 0.00 1.25 4.73 4.81 136.75 3.08 0.65 46 E21a_E22a KnownJunction 0 0.00 0.00 0.88 4.77 127.30 3.99 0.00 47 ER22a ExonRegion 0 0.00 1.04 5.26 2.40 128.66 6.03 0.00 48 E22a_E23a KnownJunction 0 0.65 0.00 0.00 0.00 5.62 0.00 0.00 49 E22a_E24a KnownJunction 0 0.73 1.08 9.27 0.00 177.81 8.84 0.00 50 E23a_E24a KnownJunction 0 0.00 0.00 0.00 0.00 8.81 0.00 0.00 51 ER23a ExonRegion 0 0.00 0.00 0.00 0.00 10.37 0.00 0.00 52 ER24a ExonRegion 0 0.03 0.20 5.51 0.78 199.81 3.68 0.41 53 E24a_E25a KnownJunction 0 0.00 0.00 3.33 2.71 243.18 1.21 0.89 54 ER25a ExonRegion 0 1.17 0.25 6.53 3.42 213.09 6.58 0.27 55 E25a_E26a KnownJunction 0 0.00 1.34 9.33 7.04 200.95 9.81 0.00 56 ER26a ExonRegion 0 1.22 2.86 6.38 5.02 160.56 5.55 4.95 57 E26a_E27a KnownJunction 0 0.00 1.16 5.96 4.66 144.56 5.55 0.00 58 ER27a ExonRegion 0 0.04 1.27 5.24 2.81 124.49 10.55 0.59 59 E27a_E28a KnownJunction 0 0.00 0.00 5.04 2.82 146.92 7.96 0.80 60 ER28a ExonRegion 0 1.07 0.89 3.80 3.08 142.37 5.43 0.74 61 E28a_E29a KnownJunction 0 0.00 0.00 3.89 1.11 132.81 6.06 0.66 62 ER29a ExonRegion 0 0.07 1.87 2.50 1.79 124.01 3.43 0.42 63 E29a_E30a KnownJunction 0 0.00 0.00 1.65 0.00 146.32 2.84 0.00 64 ER30a ExonRegion 0 1.62 2.73 4.00 1.08 154.31 1.89 0.00 65 E30a_E31a KnownJunction 0 1.79 1.55 2.85 1.57 75.89 0.00 0.00 66 ER31a ExonRegion 0 1.54 0.78 2.51 1.25 94.74 1.23 0.00 67 E31a_E32a KnownJunction 0 0.00 0.00 4.35 1.46 136.29 4.02 0.00 68 ER32a ExonRegion 0 0.12 1.21 1.86 3.62 131.39 1.79 0.03 69 E32_Da NovelBoundary 0 3.82 12.93 1.78 0.00 2.14 6.24 4.34 70 E32a_E33a KnownJunction 0 0.00 0.00 1.38 3.68 122.02 3.86 0.00 71 E33_Aa NovelBoundary 0 1.03 15.79 3.06 0.00 7.05 0.00 1.75 72 ER33a ExonRegion 0 2.18 1.60 4.36 8.35 154.05 7.60 2.65 73 E33a_E34a KnownJunction 0 0.88 1.44 3.08 0.00 121.97 2.39 0.00 74 E34_Aa NovelBoundary 0 1.77 2.97 0.68 1.33 3.85 2.52 8.04 75 ER34a ExonRegion 0 0.32 0.55 2.53 1.27 117.67 2.91 0.00 76 E34_Da NovelBoundary 0 2.57 7.30 0.00 0.00 5.23 3.14 10.32 77 E34a_E35a KnownJunction 0 0.00 0.00 0.82 3.01 106.09 5.60 0.00 78 I34 Intron 0 0.95 3.81 0.43 2.35 5.46 0.00 7.63 79 I34_AR1 ActiveIntronRegion 0 0.96 3.86 0.43 2.39 5.55 0.00 7.74 80 E35_Aa NovelBoundary 0 0.00 7.72 0.82 1.30 7.31 4.88 8.79 81 ER35a ExonRegion 0 0.05 0.00 0.36 4.03 86.99 6.26 0.00 82 E35_Da NovelBoundary 0 0.87 18.44 0.00 1.11 9.04 0.00 4.94 83 E35a_E36a KnownJunction 0 0.00 0.00 0.80 4.71 58.07 3.19 0.00 84 I35 Intron 0 3.09 7.35 0.90 1.90 6.00 1.85 7.42 85 I35_AR1 ActiveIntronRegion 0 3.13 7.43 0.92 1.92 6.07 1.86 7.50 86 ER36a ExonRegion 0 5.44 4.36 1.62 3.67 88.38 5.14 4.01 87 E36a_E37a KnownJunction 0 0.77 0.00 0.00 0.00 106.32 3.24 0.00 88 ER37a ExonRegion 0 0.01 0.00 1.39 0.10 83.67 2.55 0.01 89 E37a_E38a NovelJunction 0 0.83 0.00 0.00 0.00 16.85 0.00 0.00 90 E37a_E38b KnownJunction 0 0.00 0.00 1.98 1.08 76.70 3.30 0.00 91 E37b_E38a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 92 ER37b ExonRegion 0 0.00 0.00 0.00 0.00 7.29 0.00 0.00 93 ER38a ExonRegion 0 0.00 0.00 1.35 0.16 22.88 0.31 0.00 94 ER38b ExonRegion 0 0.82 0.00 3.44 3.28 109.30 2.63 0.00 95 E38a_E39a KnownJunction 0 1.03 0.00 2.28 5.82 64.18 2.71 0.00 96 ER39a ExonRegion 0 2.74 2.48 3.31 3.50 93.85 5.87 1.15