Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ANKRD28	Gene	0	134.37	86.69	122.95	94.24	188.70	125.45	63.13
2	399451	Transcript	1	28.35	27.97	25.61	34.17	28.98	12.80	10.97
3	383777	Transcript	1	11.03	4.01	6.47	4.30	1.51	22.98	6.34
4	383776	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	IG5_SR4	SilentIntergenicRegion	0	4.07	1.36	5.68	1.94	8.89	1.06	2.39
6	ER1a	ExonRegion	0	10.39	17.71	11.87	21.34	18.58	8.52	6.20
7	E1a_E4a	KnownJunction	1	46.31	38.22	39.36	47.00	39.37	17.07	15.74
8	ER2a	ExonRegion	1	16.84	2.56	7.25	6.06	2.03	31.41	7.10
9	E2a_E4a	KnownJunction	1	5.22	5.46	5.69	2.55	0.99	14.55	5.57
10	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER4a	ExonRegion	0	86.00	85.91	92.31	73.30	73.60	90.94	44.23
12	E4a_E5a	KnownJunction	0	123.91	131.75	142.55	96.99	100.81	116.77	54.29
13	ER5a	ExonRegion	0	121.02	113.32	141.27	97.83	102.73	105.61	56.80
14	E5a_E6a	KnownJunction	0	96.48	83.65	123.01	108.74	109.06	83.35	50.35
15	E5a_E7a	NovelJunction	0	9.40	16.00	7.50	11.35	5.46	24.23	5.53
16	ER6a	ExonRegion	0	97.54	109.75	128.74	107.63	132.52	87.67	59.76
17	E6a_E7a	KnownJunction	0	107.92	118.22	128.61	103.98	156.23	100.79	60.21
18	E6a_E8a	NovelJunction	1	14.70	14.21	26.83	4.23	17.73	10.40	6.28
19	ER7a	ExonRegion	0	146.27	125.30	143.53	107.98	196.98	111.57	75.58
20	E7a_E8a	KnownJunction	0	183.29	118.20	162.13	135.97	239.15	126.39	98.39
21	ER8a	ExonRegion	0	267.63	153.89	229.93	156.00	266.76	159.92	98.10
22	E8a_E9a	KnownJunction	0	283.85	148.46	243.69	156.13	313.84	154.72	98.50
23	ER9a	ExonRegion	0	247.88	163.84	240.31	163.10	291.77	139.39	111.39
24	E9a_E10a	KnownJunction	0	237.81	140.11	227.17	153.06	259.97	150.91	101.67
25	ER10a	ExonRegion	0	173.30	153.73	197.44	158.40	247.29	151.37	100.80
26	E10a_E11a	KnownJunction	0	142.23	134.72	174.80	101.21	239.73	124.65	84.20
27	E10a_E12a	NovelJunction	1	7.33	18.31	3.16	4.31	1.08	5.71	0.00
28	ER11a	ExonRegion	0	131.20	140.94	172.46	122.58	208.89	157.32	102.13
29	E11a_E12a	KnownJunction	0	116.93	152.27	157.11	109.58	172.11	150.53	87.12
30	ER12a	ExonRegion	0	122.68	141.17	158.64	126.91	202.55	137.71	90.67
31	E12a_E13a	KnownJunction	0	129.45	139.76	181.15	126.08	234.89	154.98	96.49
32	ER13a	ExonRegion	0	123.55	106.56	150.24	110.45	196.82	125.51	73.81
33	E13a_E14a	KnownJunction	0	127.54	98.49	118.48	98.86	204.02	101.52	68.29
34	ER14a	ExonRegion	0	125.92	88.44	148.23	92.45	199.43	101.99	65.69
35	E14a_E15a	KnownJunction	0	132.69	83.73	162.56	93.11	233.89	114.94	59.00
36	I14_SR2	SilentIntronRegion	0	32.59	10.66	19.00	3.51	4.90	9.47	2.67
37	I14_AR2	ActiveIntronRegion	1	33.34	5.75	14.53	11.85	3.90	9.33	1.90
38	I14_AR3	ActiveIntronRegion	1	38.87	6.87	13.54	6.80	5.48	16.25	0.67
39	E15_Aa	NovelBoundary	1	53.83	7.93	18.31	13.19	4.22	23.66	0.89
40	ER15a	ExonRegion	0	181.45	98.93	172.00	123.83	237.26	145.59	72.76
41	E15a_E16a	KnownJunction	0	237.93	111.76	165.35	140.44	281.08	173.13	70.17
42	ER16a	ExonRegion	0	212.04	138.56	173.54	136.48	234.08	155.33	84.91
43	E16a_E17a	KnownJunction	0	232.79	127.65	160.76	152.04	230.02	141.18	86.76
44	ER17a	ExonRegion	0	188.69	139.45	173.09	150.54	283.59	159.65	96.44
45	E17a_E18a	KnownJunction	0	95.22	98.96	110.36	143.39	227.28	135.39	68.81
46	E18a_E19a	KnownJunction	0	113.73	100.91	112.81	131.83	160.66	135.18	72.29
47	ER18a	ExonRegion	0	139.26	140.34	152.19	189.95	226.88	184.35	98.19
48	ER19a	ExonRegion	0	156.40	139.60	156.27	161.17	227.38	171.03	91.49
49	E19a_E20a	KnownJunction	0	156.65	127.97	154.85	139.95	220.78	121.97	87.09
50	ER20a	ExonRegion	0	171.37	151.71	184.37	156.27	280.09	184.67	111.79
51	E20a_E21a	KnownJunction	0	160.21	145.52	190.59	152.71	296.48	221.23	110.61
52	ER21a	ExonRegion	0	165.35	143.70	196.69	142.20	249.66	206.04	112.61
53	E21a_E22a	KnownJunction	0	165.85	133.14	172.40	126.08	294.20	207.46	100.84
54	ER22a	ExonRegion	0	141.09	137.39	147.72	138.42	261.60	172.70	103.46
55	E22a_E23a	KnownJunction	0	122.54	131.12	149.48	133.64	202.47	180.44	89.43
56	ER23a	ExonRegion	0	180.03	134.32	144.79	141.68	321.70	163.11	96.36
57	E23a_E24a	KnownJunction	0	315.27	144.41	170.82	186.22	340.72	233.10	107.11
58	E23a_E26a	NovelJunction	0	2.75	18.05	6.83	8.24	1.18	7.75	0.00
59	ER24a	ExonRegion	0	361.58	158.15	203.97	201.54	348.65	225.03	112.04
60	E24a_E25a	KnownJunction	0	364.74	159.07	216.35	202.86	368.13	223.46	104.39
61	ER25a	ExonRegion	0	304.09	137.94	193.23	191.87	464.40	191.18	114.18
62	E25a_E26a	KnownJunction	0	241.14	115.86	167.74	139.98	406.81	156.35	96.72
63	ER26a	ExonRegion	0	191.55	140.95	163.93	153.72	290.19	173.97	100.60
64	E26a_E27a	KnownJunction	0	131.08	154.34	163.03	155.83	309.42	181.01	113.62
65	ER27a	ExonRegion	0	134.24	142.05	182.57	154.29	299.44	176.38	127.28
66	E27a_E28a	KnownJunction	0	129.25	114.12	167.50	129.12	247.98	175.83	118.26
67	ER28a	ExonRegion	0	117.66	119.39	158.83	141.63	262.87	178.29	102.96
68	E28a_E29a	KnownJunction	0	112.86	102.43	160.86	123.35	255.98	148.79	90.43
69	I28	Intron	1	33.14	12.00	14.88	9.71	17.98	7.76	1.98
70	I28_AR1	ActiveIntronRegion	1	33.21	12.02	14.90	9.73	18.01	7.77	1.98
71	E29_Aa	NovelBoundary	1	49.25	16.89	21.60	15.71	36.19	16.00	1.62
72	ER29a	ExonRegion	0	161.51	124.03	175.67	128.37	299.11	180.99	112.17
73	E29a_E30a	KnownJunction	0	155.43	113.81	163.82	127.25	335.35	158.87	80.34
74	I29	Intron	1	26.98	7.22	11.63	7.37	7.31	8.01	1.83
75	I29_SR1	SilentIntronRegion	0	29.51	8.66	12.11	7.46	7.96	11.21	2.48
76	I29_SR2	SilentIntronRegion	1	27.85	5.10	10.03	6.97	8.17	4.19	0.92
77	ER30a	ExonRegion	0	111.73	52.46	93.31	62.60	150.81	110.28	41.74
78	IG4	Intergenic	0	8.94	6.17	6.12	10.33	11.61	3.92	2.19
79	IG4_AR5	ActiveIntergenicRegion	0	5.48	5.41	6.05	10.18	5.97	3.11	0.80
80	IG4_AR3	ActiveIntergenicRegion	0	20.10	8.22	12.74	14.29	30.86	2.66	3.58
81	IG4_SR2	SilentIntergenicRegion	0	4.26	2.89	5.25	1.69	10.19	3.41	1.41
82	IG4_AR2	ActiveIntergenicRegion	0	14.47	9.72	8.39	14.97	20.07	5.98	4.50
83	IG4_SR1	SilentIntergenicRegion	0	5.72	4.91	3.96	12.18	9.46	5.71	1.63
84	IG4_AR1	ActiveIntergenicRegion	0	8.23	7.78	5.85	10.78	6.34	1.50	1.88