Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SETD5	Gene	0	267.97	230.86	290.88	303.39	434.13	239.07	153.45
2	402198	Transcript	0	0	0	0	0	0	0	0
3	402466	Transcript	0	0	0	0	0	0	0	0
4	406341	Transcript	0	0.00	5.78	0.00	1.68	1.13	7.40	0.00
5	399686	Transcript	0	3.12	1.62	1.58	3.16	2.32	1.88	0.27
6	407969	Transcript	0	76.32	84.96	111.83	83.99	105.27	68.63	44.68
7	302463	Transcript	0	48.61	74.32	63.43	104.18	111.83	54.97	44.89
8	ER1a	ExonRegion	0	10.35	12.25	12.13	18.58	8.63	15.96	6.45
9	E1_Ab	KnownBoundary	0	50.44	49.08	56.99	100.29	46.54	65.12	38.69
10	ER1b	ExonRegion	0	42.87	70.58	49.69	88.36	42.32	68.79	34.35
11	E1a_E2a	KnownJunction	0	30.13	72.22	50.05	52.10	42.46	41.11	32.82
12	E1a_E4a	KnownJunction	0	0.00	5.78	0.00	1.68	1.13	7.40	0.00
13	ER2a	ExonRegion	0	60.30	104.03	96.65	121.43	96.90	97.94	55.22
14	E2a_E4a	KnownJunction	0	91.54	146.52	141.75	199.82	116.65	150.99	68.49
15	E3_Aa	NovelBoundary	0	334.78	291.14	240.23	208.52	103.02	275.15	147.38
16	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E3_Da	NovelBoundary	0	1373.18	770.78	949.19	568.07	701.91	541.11	575.18
18	E3a_E13b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER4a	ExonRegion	0	115.92	211.82	169.23	224.95	146.91	194.40	90.82
20	E4_Ab	KnownBoundary	0	124.84	228.25	181.28	253.44	161.14	191.70	103.77
21	ER4b	ExonRegion	0	79.59	216.42	133.47	196.87	124.82	154.42	81.02
22	E4a_E6a	KnownJunction	0	24.55	117.43	36.77	95.25	13.90	75.41	24.05
23	I4_AR2	ActiveIntronRegion	1	33.16	55.56	44.28	75.32	121.70	55.35	39.69
24	E5_Aa	NovelBoundary	0	121.00	136.03	146.88	179.13	201.78	104.52	75.96
25	ER5a	ExonRegion	0	66.61	66.97	83.16	105.12	149.12	61.02	48.01
26	E5_Da	NovelBoundary	1	70.45	62.74	29.04	26.77	32.50	19.51	48.54
27	E5a_E6a	KnownJunction	0	30.61	81.68	43.70	103.24	74.55	48.91	41.76
28	I5_AR4	ActiveIntronRegion	0	76.92	45.04	96.84	73.11	118.47	39.16	25.82
29	ER6a	ExonRegion	0	149.64	226.46	207.61	256.98	273.52	178.46	111.73
30	E6a_E7a	KnownJunction	0	85.19	73.06	124.13	72.79	111.71	64.02	50.13
31	E6a_E7b	KnownJunction	0	79.74	130.83	131.19	186.55	252.87	105.06	80.94
32	ER7a	ExonRegion	0	67.46	96.85	99.53	95.18	98.83	73.24	39.22
33	E7_Ab	KnownBoundary	0	59.40	133.85	87.73	112.59	83.80	98.52	30.55
34	ER7b	ExonRegion	0	140.88	239.19	235.53	275.54	317.11	179.43	118.23
35	E7a_E8a	KnownJunction	0	85.52	153.50	132.48	166.69	136.70	126.20	67.63
36	E7a_E9a	NovelJunction	0	13.44	55.12	8.51	63.96	1.13	54.78	0.89
37	ER8a	ExonRegion	0	133.41	153.24	185.83	164.45	233.76	106.54	88.41
38	E8a_E9a	KnownJunction	0	215.77	172.45	233.02	177.58	297.08	85.60	115.94
39	E9_Aa	NovelBoundary	1	108.90	6.25	104.21	2.98	4.43	1.18	8.71
40	ER9a	ExonRegion	0	509.77	297.85	467.52	366.63	567.69	224.35	157.77
41	E9a_E10a	KnownJunction	1	134.10	36.86	133.36	34.95	88.66	15.09	46.15
42	E9a_E11a	KnownJunction	1	754.05	320.56	580.65	439.39	684.88	334.68	127.13
43	ER10a	ExonRegion	1	145.85	54.73	164.55	52.60	96.16	22.63	51.79
44	E10a_E11a	KnownJunction	0	126.78	57.88	147.22	68.22	93.83	33.50	44.57
45	ER11a	ExonRegion	1	698.03	302.49	645.39	376.61	766.76	270.71	170.52
46	E11a_E12a	KnownJunction	0	458.64	306.19	562.86	384.21	531.28	228.60	183.08
47	ER12a	ExonRegion	0	443.05	256.60	522.82	320.27	633.22	199.49	174.72
48	E12a_E13a	KnownJunction	0	486.66	311.95	561.62	414.17	589.83	212.12	200.45
49	ER13a	ExonRegion	0	399.64	306.27	497.76	392.39	483.48	215.07	192.14
50	E13_Ab	KnownBoundary	0	329.03	299.73	429.76	359.50	449.16	202.23	173.04
51	ER13b	ExonRegion	0	287.04	267.10	370.56	346.91	571.14	173.42	188.43
52	E13a_E14a	KnownJunction	0	311.50	228.59	411.39	280.23	613.34	138.50	192.53
53	E13a_E15a	NovelJunction	1	16.14	11.87	14.04	53.18	0.00	27.55	1.61
54	I13_AR3	ActiveIntronRegion	0	55.16	15.52	26.64	1.25	17.19	3.41	9.37
55	I13_AR4	ActiveIntronRegion	0	59.17	13.19	29.03	2.49	16.43	2.45	10.02
56	ER14a	ExonRegion	0	348.49	264.91	425.73	304.49	599.51	167.76	225.42
57	E14a_E15a	KnownJunction	0	281.19	245.22	357.07	311.87	460.78	165.97	171.56
58	ER15a	ExonRegion	0	404.91	350.32	482.51	443.96	484.41	300.57	202.11
59	E15a_E16a	KnownJunction	0	320.11	285.02	428.18	398.48	331.55	260.12	152.74
60	ER16a	ExonRegion	0	258.19	271.90	370.97	354.43	311.27	264.55	151.90
61	E16a_E17a	KnownJunction	0	254.15	282.55	334.20	347.44	292.40	238.36	149.84
62	ER17a	ExonRegion	0	193.24	212.97	266.19	310.22	225.28	205.57	128.47
63	E17a_E18a	KnownJunction	0	202.97	236.05	305.34	315.88	286.96	223.13	118.94
64	ER18a	ExonRegion	0	412.36	329.37	434.10	455.58	657.60	290.18	217.88
65	E18a_E19a	KnownJunction	0	458.22	388.27	444.36	535.75	604.72	363.22	236.97
66	ER19a	ExonRegion	0	408.98	340.89	411.37	443.17	767.91	309.81	240.86
67	E19a_E20a	KnownJunction	0	216.03	259.06	304.22	326.01	475.46	309.46	182.75
68	ER20a	ExonRegion	0	219.40	298.70	297.94	372.72	495.26	311.80	182.46
69	E20a_E21a	KnownJunction	0	190.45	249.82	211.99	280.53	365.96	221.77	121.13
70	ER21a	ExonRegion	0	296.50	304.53	351.64	393.28	641.09	328.27	221.73
71	E21a_E22a	KnownJunction	0	181.12	224.70	282.20	332.98	457.78	299.09	179.04
72	I21	Intron	0	54.48	27.59	37.53	21.00	27.75	11.19	24.31
73	I21_AR1	ActiveIntronRegion	0	55.81	26.28	31.56	17.16	23.31	9.53	21.04
74	I21_SR2	SilentIntronRegion	1	39.51	34.14	35.90	37.31	36.52	15.57	32.08
75	I21_AR3	ActiveIntronRegion	1	51.56	35.95	39.76	31.39	41.47	12.31	37.63
76	I21_SR4	SilentIntronRegion	0	73.81	29.78	40.79	23.82	19.65	10.18	15.49
77	I21_AR5	ActiveIntronRegion	0	84.29	39.27	63.09	28.58	34.08	16.52	32.90
78	I21_SR5	SilentIntronRegion	0	64.74	40.54	54.66	21.87	33.46	14.01	32.00
79	ER22a	ExonRegion	0	254.85	275.03	325.99	391.02	505.71	314.62	196.17
80	E22a_E23a	KnownJunction	0	342.58	242.77	344.33	308.11	361.77	324.09	147.51
81	ER23a	ExonRegion	0	276.99	311.17	347.17	383.50	489.23	337.37	189.71
82	E23a_E24a	KnownJunction	0	224.03	348.44	316.61	425.44	579.09	383.00	180.95
83	ER24a	ExonRegion	0	195.96	350.60	285.01	459.74	476.51	429.67	201.60
84	E24a_E25a	KnownJunction	0	213.13	369.19	323.92	479.70	553.13	480.41	235.02
85	I24	Intron	1	113.90	43.55	93.69	52.10	162.66	11.70	13.86
86	I24_AR1	ActiveIntronRegion	0	114.37	43.73	94.07	52.31	163.32	11.75	13.92
87	E25_Aa	NovelBoundary	1	127.36	46.50	98.35	47.22	196.04	12.17	12.75
88	ER25a	ExonRegion	0	288.56	389.71	406.87	525.77	706.45	521.60	291.96
89	E25a_E26a	KnownJunction	0	203.52	366.49	309.97	466.43	379.43	465.97	220.40
90	ER25b	ExonRegion	0	9.37	4.86	4.74	9.48	6.96	5.64	0.81
91	I25	Intron	0	87.24	58.23	77.18	55.63	50.90	33.04	32.19
92	I25_AR1	ActiveIntronRegion	0	87.75	58.57	77.63	55.95	51.19	33.23	32.38
93	E26_Aa	NovelBoundary	0	86.70	65.81	89.63	84.06	22.52	42.80	29.06
94	ER26a	ExonRegion	0	308.88	356.20	319.24	468.21	549.96	390.78	205.23
95	ER26b	ExonRegion	0	293.80	283.06	265.53	433.11	532.34	319.99	163.93
96	ER26c	ExonRegion	0	231.70	237.93	236.86	342.30	405.61	277.82	133.90
97	E26_Db	KnownBoundary	0	77.73	57.09	120.75	99.80	144.73	100.39	43.02
98	ER26d	ExonRegion	0	227.78	129.01	196.35	176.71	365.22	174.83	125.57