Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	HES6	Gene	0	4.39	9.92	3.73	6.68	27.09	12.49	6.30
2	409574	Transcript	0	0.00	0.00	0.00	0.00	1.80	0.00	0.00
3	409160	Transcript	0	1.00	2.44	0.71	1.93	3.05	4.70	1.57
4	272937	Transcript	0	0.77	0.00	2.03	0.00	9.72	0.00	2.02
5	409356	Transcript	0	0.01	0.98	0.00	1.31	0.55	1.73	0.02
6	409002	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	409182	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.20	0.00	0.00
9	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	0.90	0.00	0.00
10	ER1c	ExonRegion	0	0.00	0.00	0.00	0.75	1.62	0.49	0.00
11	ER1d	ExonRegion	0	0.00	1.05	0.00	2.78	2.58	3.98	0.34
12	E1_Ae	KnownBoundary	0	0.00	1.60	0.00	2.84	2.21	4.69	0.00
13	E1_Af	KnownBoundary	0	0.00	1.52	0.00	1.49	3.43	4.13	0.89
14	ER1e	ExonRegion	0	0.00	2.43	0.21	3.74	4.05	7.36	0.67
15	ER1f	ExonRegion	0	0.61	4.41	0.37	2.91	3.43	5.63	0.65
16	E1_Da	KnownBoundary	0	0.00	0.00	0.00	3.14	0.97	3.94	0.00
17	E1a_E1g	KnownJunction	0	1.03	3.89	0.00	1.68	2.33	6.51	1.56
18	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER1g	ExonRegion	0	0.01	0.98	0.00	1.31	0.55	1.73	0.02
20	E1_Ag	KnownBoundary	0	0.00	1.23	0.00	1.46	0.00	1.31	0.00
21	ER1h	ExonRegion	0	0.39	6.41	0.60	2.03	10.90	5.77	1.55
22	E1b_E2a	KnownJunction	0	1.65	10.98	1.29	2.52	7.08	9.84	5.03
23	E1b_E2b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER2a	ExonRegion	0	0.00	11.63	1.35	2.85	10.53	7.36	3.37
25	ER2b	ExonRegion	0	0.00	9.75	0.81	6.20	14.42	8.37	3.39
26	E2_Da	KnownBoundary	0	0.00	4.65	1.42	8.21	14.48	8.25	3.51
27	E2a_E2c	KnownJunction	0	0.00	0.00	0.00	0.00	3.39	0.00	0.00
28	ER2c	ExonRegion	0	0.08	2.89	0.63	7.70	10.95	6.44	3.56
29	E2_Db	KnownBoundary	0	0.00	0.00	0.00	2.74	1.18	0.00	0.87
30	E2b_E2c	KnownJunction	0	0.80	0.00	1.32	1.52	9.45	5.39	2.78
31	ER2d	ExonRegion	0	1.00	2.44	0.71	1.93	3.05	4.70	1.57
32	E2_Ac	KnownBoundary	0	3.30	6.25	1.47	5.01	5.35	7.18	4.14
33	ER2e	ExonRegion	0	2.23	16.96	3.48	10.95	24.94	17.48	10.21
34	E2_Dc	KnownBoundary	0	2.35	14.13	3.95	20.07	32.32	18.76	12.50
35	ER2f	ExonRegion	0	5.18	13.63	3.53	9.90	40.83	14.97	8.28
36	E2_Dd	KnownBoundary	1	9.95	5.73	7.04	12.76	42.88	17.58	8.24
37	ER2g	ExonRegion	0	9.65	12.09	6.72	6.67	47.88	21.55	12.17
38	E2_De	KnownBoundary	0	12.32	13.58	10.40	7.69	62.61	27.76	12.71
39	ER2h	ExonRegion	0	8.42	16.91	8.62	11.28	46.04	18.38	9.64
40	ER2i	ExonRegion	0	1.92	1.21	2.60	0.00	19.17	1.02	3.49
41	ER2j	ExonRegion	0	0.77	0.00	2.03	0.00	9.72	0.00	2.02