Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 PTMA Gene 0 2517.08 3579.90 2253.39 2365.02 5081.88 3817.86 762.13 2 409321 Transcript 0 0.38 0.91 0.39 1.24 1.35 1.53 0.00 3 409115 Transcript 0 58.75 51.19 104.28 31.36 310.35 52.27 22.82 4 409405 Transcript 0 377.56 978.61 442.69 547.65 5029.51 706.71 229.63 5 409683 Transcript 0 0.90 0.00 2.46 3.36 1.08 0.99 0.00 6 341369 Transcript 0 856.95 2044.37 800.36 1176.10 2482.62 1586.06 430.74 7 410064 Transcript 1 24.06 22.93 21.21 47.94 3.55 50.29 1.28 8 358839 Transcript 0 322.38 865.93 334.68 573.61 0.00 922.66 176.63 9 IG10_AR6 ActiveIntergenicRegion 0 7.24 16.92 4.52 12.42 3.90 19.05 1.03 10 IG10_AR7 ActiveIntergenicRegion 0 6.92 28.64 8.03 15.05 3.30 31.09 1.78 11 IG10_AR8 ActiveIntergenicRegion 0 7.51 25.78 7.07 13.30 4.59 24.25 1.35 12 ER1a ExonRegion 0 0.77 1.82 0.78 2.49 2.70 3.06 0.00 13 E1a_E2e KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER2a ExonRegion 0 0.95 4.79 0.16 2.86 0.62 1.15 0.67 15 E2_Ad KnownBoundary 0 209.39 278.66 216.85 186.50 3357.48 288.93 96.21 16 ER2b ExonRegion 0 19.77 27.17 24.82 19.95 126.41 25.97 9.32 17 ER2c ExonRegion 0 1159.71 3068.37 1006.91 2404.66 6299.55 3801.60 682.17 18 ER2d ExonRegion 0 1136.61 4398.03 934.97 3014.31 3098.01 4778.49 607.48 19 E2_Ae KnownBoundary 0 1235.56 7549.91 1264.56 5429.03 3592.05 8825.35 1030.19 20 ER2e ExonRegion 0 2941.41 8216.01 2601.44 5665.62 6360.62 8886.92 1573.46 21 E2a_E4a KnownJunction 0 4302.20 7789.90 3568.82 5070.37 9540.05 7522.94 1936.40 22 ER3a ExonRegion 0 42.23 43.02 40.38 80.08 7.10 80.14 2.57 23 E3_Ab KnownBoundary 0 17.04 36.60 11.17 60.28 0.00 55.18 0.00 24 ER3b ExonRegion 0 8.09 18.01 4.30 32.19 1.89 41.40 0.00 25 E3_Da KnownBoundary 0 5.54 1.42 3.32 10.76 0.00 16.48 0.00 26 E3a_E3c KnownJunction 0 8.91 12.77 4.25 35.14 0.00 40.31 0.00 27 E3_Ac KnownBoundary 0 0.90 1.42 0.00 1.27 0.97 1.37 0.00 28 ER3c ExonRegion 0 5.89 2.83 2.03 15.79 0.00 20.43 0.00 29 ER3d ExonRegion 0 25.43 50.91 23.09 41.00 61.52 66.76 9.18 30 E3b_E4a KnownJunction 0 0.00 1.00 0.00 0.00 0.00 0.00 0.00 31 E4a_E4b KnownJunction 0 635.85 1719.10 665.10 1112.09 0.00 1805.02 353.26 32 E4_Ab NovelBoundary 0 2461.16 3453.12 1864.82 2173.41 5160.08 3264.88 838.75 33 ER4a ExonRegion 0 4334.40 8399.89 3765.13 5371.48 8814.38 8032.37 1978.92 34 E4_Db KnownBoundary 0 2795.41 5569.18 2365.30 3355.83 2999.45 4921.43 1280.87 35 E4b_E6c KnownJunction 0 377.56 978.61 442.69 547.65 5029.51 706.71 229.63 36 ER4b ExonRegion 0 4758.77 8593.90 3960.93 5282.13 8089.44 7902.53 2020.41 37 ER4c ExonRegion 0 4955.55 8750.16 4001.90 5308.32 7635.79 7835.19 1993.00 38 ER4d ExonRegion 0 4361.80 9576.38 3712.01 5527.69 6509.48 8064.23 1989.86 39 E4c_E5a KnownJunction 0 360.69 821.09 356.03 482.68 1691.41 624.81 170.36 40 E4c_E5b KnownJunction 0 3992.25 9557.86 3433.68 5367.56 6724.81 7673.90 2011.09 41 E4c_E6a NovelJunction 0 27.54 189.23 15.16 117.49 48.60 189.66 7.98 42 ER5a ExonRegion 0 1353.22 3267.66 1244.69 1869.51 3273.82 2547.32 691.12 43 ER5b ExonRegion 0 4240.18 10679.63 4403.74 6078.02 8115.97 8394.13 2227.57 44 E5_Da NovelBoundary 1 887.07 55.56 938.87 86.72 48.90 45.10 10.86 45 E5a_E6a KnownJunction 0 3403.81 8950.78 3456.63 5117.40 11559.55 7331.21 1889.20 46 E5a_E6b KnownJunction 0 0.90 0.00 2.46 3.36 1.08 0.99 0.00 47 E5a_E7a NovelJunction 0 27.86 137.11 11.54 51.64 27.13 96.10 15.01 48 E6_Ac NovelBoundary 0 1732.93 4753.74 1763.90 2604.89 7651.54 3613.98 992.51 49 ER6a ExonRegion 0 3335.01 8995.65 3571.37 5054.44 14413.17 7080.62 1883.33 50 ER6b ExonRegion 0 3403.02 8770.66 3619.60 4955.43 16828.31 6938.53 1920.23 51 ER6c ExonRegion 0 4804.55 8860.27 4407.00 5285.09 14978.44 7287.60 2312.80 52 E6a_E7a KnownJunction 0 6404.41 8392.94 5043.64 5461.89 8250.54 7506.53 2688.73 53 ER7a ExonRegion 0 4347.27 7746.33 3499.40 5049.55 4796.36 7176.66 1920.99 54 E7_Da KnownBoundary 0 1911.03 2889.23 1635.11 2036.11 1841.99 2772.84 910.73 55 E7_Db KnownBoundary 0 77.34 3023.08 60.96 1563.37 194.47 2685.20 11.12 56 ER7b ExonRegion 0 2033.13 6752.18 1716.90 4229.95 2436.20 6330.07 1000.96 57 ER7c ExonRegion 0 4896.42 4819.28 4238.52 3238.48 9186.04 5164.06 1117.10 58 E7_Dc KnownBoundary 0 8480.29 3590.78 7264.97 2770.36 10533.74 4960.77 1271.40 59 ER7d ExonRegion 0 8270.90 4261.94 7209.12 3253.84 13877.69 5849.48 1443.96 60 E7_Dd KnownBoundary 0 4850.50 4376.16 4694.95 3228.45 6806.95 6003.42 1031.20 61 ER7e ExonRegion 0 3053.94 6609.07 2936.59 4957.70 5281.57 9108.02 634.45 62 E7_De KnownBoundary 0 1934.45 6434.82 1410.13 4747.47 7104.79 8829.85 216.30 63 ER7f ExonRegion 0 2590.95 3624.81 2455.00 2506.88 6663.03 5098.58 600.99 64 ER7g ExonRegion 0 116.55 97.59 208.41 59.85 620.08 103.39 44.97