Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	DIS3L2	Gene	0	46.10	23.25	58.67	19.30	37.31	7.36	33.38
2	360410	Transcript	0	1.07	1.20	0.54	0.49	0.94	1.73	1.07
3	325385	Transcript	0	16.02	10.64	23.56	7.45	9.62	3.05	9.93
4	390005	Transcript	0	0.00	0.00	0.05	0.09	0.00	0.00	0.00
5	273009	Transcript	0	6.26	2.38	11.20	4.08	6.68	1.41	5.20
6	409401	Transcript	1	22.80	8.49	21.02	6.33	17.38	3.71	7.34
7	409307	Transcript	0	0	0	0	0	0	0	0
8	ER1a	ExonRegion	0	0.16	0.91	0.15	0.23	0.40	0.00	0.00
9	E1_Ab	KnownBoundary	0	0.85	0.00	1.49	1.33	0.00	0.00	0.00
10	ER1b	ExonRegion	0	7.03	7.27	10.55	3.96	5.31	1.82	7.95
11	E1a_E2a	KnownJunction	0	24.15	22.30	35.08	9.75	21.83	7.02	23.56
12	ER2a	ExonRegion	1	22.87	16.94	34.96	5.77	16.62	5.49	16.65
13	E2_Ab	KnownBoundary	0	11.73	16.84	17.01	6.53	7.63	2.28	6.69
14	ER2b	ExonRegion	0	15.99	16.46	21.85	13.91	13.13	5.22	15.97
15	E2a_E3a	KnownJunction	0	36.90	14.21	48.38	19.64	12.43	8.50	31.08
16	ER3a	ExonRegion	0	64.19	44.27	90.86	27.70	43.60	7.93	42.90
17	E3a_E4a	KnownJunction	0	71.57	36.60	108.22	34.43	36.31	10.48	48.40
18	ER4a	ExonRegion	0	89.58	43.42	136.87	42.17	43.06	16.94	58.14
19	E4a_E5a	KnownJunction	0	76.61	45.58	118.51	41.50	57.03	20.64	50.78
20	ER5a	ExonRegion	0	103.81	55.01	136.12	40.87	74.09	15.69	60.69
21	E5a_E6a	KnownJunction	0	118.53	52.75	145.74	42.26	75.52	17.69	75.99
22	ER6a	ExonRegion	0	109.55	51.54	163.83	49.54	84.49	20.99	79.49
23	E6a_E7a	KnownJunction	0	1.72	2.97	0.63	0.00	0.97	2.79	1.52
24	E6a_E8a	KnownJunction	0	103.06	33.73	178.31	43.83	96.94	18.20	66.81
25	ER7a	ExonRegion	0	1.88	1.85	1.19	0.76	0.15	3.01	1.67
26	E7a_E8a	KnownJunction	0	1.75	1.16	0.89	1.68	0.00	2.84	1.56
27	ER8a	ExonRegion	0	101.61	47.81	151.65	41.01	85.15	19.69	71.25
28	E8_Da	KnownBoundary	0	13.50	9.56	16.09	4.71	7.63	4.40	6.68
29	E8a_E9a	KnownJunction	0	89.89	35.44	148.13	35.52	85.09	7.50	59.20
30	E8a_E10a	NovelJunction	0	7.28	3.23	18.85	8.10	0.00	0.00	5.80
31	ER8b	ExonRegion	1	22.80	8.49	21.02	6.33	17.38	3.71	7.34
32	ER9a	ExonRegion	0	106.71	37.90	132.40	38.54	89.25	11.27	63.37
33	E9a_E10a	KnownJunction	0	73.55	14.82	77.43	31.45	86.43	8.36	40.27
34	E9b_E10b	KnownJunction	0	0.00	0.00	0.00	0.00	2.77	0.00	0.59
35	ER9b	ExonRegion	0	0.00	0.00	0.00	0.00	0.81	0.00	0.00
36	E10_Ab	NovelBoundary	1	28.82	0.00	31.00	0.00	0.00	0.00	0.00
37	ER10a	ExonRegion	0	119.57	27.21	129.38	37.41	101.72	8.58	56.53
38	ER10b	ExonRegion	0	136.88	32.03	153.27	35.05	78.92	5.48	62.82
39	E10_Da	KnownBoundary	0	147.24	38.99	175.20	34.60	86.38	4.88	81.60
40	ER10c	ExonRegion	0	117.08	40.75	152.84	35.46	81.52	5.32	68.58
41	E10b_E11a	KnownJunction	0	101.27	26.53	135.25	27.80	137.49	8.28	57.11
42	ER11a	ExonRegion	0	93.22	29.82	114.16	28.71	88.11	8.49	49.12
43	E11a_E12a	KnownJunction	0	70.97	31.32	98.80	24.73	59.41	12.84	39.37
44	ER12a	ExonRegion	0	83.81	42.36	102.03	36.85	66.97	11.45	61.51
45	E12a_E13a	KnownJunction	0	108.45	57.59	122.18	37.11	78.33	15.25	83.35
46	ER13a	ExonRegion	0	85.83	47.81	110.68	41.76	78.92	13.22	68.45
47	E13a_E14a	KnownJunction	0	70.10	38.75	92.76	36.03	76.12	10.05	59.39
48	ER14a	ExonRegion	0	74.09	41.09	88.05	40.41	67.57	9.59	74.08
49	E14_Da	KnownBoundary	0	54.86	35.55	72.14	36.09	51.94	10.59	75.71
50	E14a_E24a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	ER14b	ExonRegion	0	57.84	50.76	75.06	38.45	47.60	11.32	70.76
52	E14b_E15a	KnownJunction	0	41.72	39.64	59.91	35.03	37.28	16.16	62.40
53	E15_Aa	NovelBoundary	1	11.68	0.00	20.75	0.00	0.00	0.00	0.89
54	ER15a	ExonRegion	0	36.99	35.85	57.53	28.09	34.26	10.70	48.73
55	E15a_E16a	KnownJunction	0	36.13	32.50	48.60	17.64	40.96	12.78	55.16
56	E15a_E16b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
57	ER16a	ExonRegion	0	40.74	26.94	63.20	23.88	37.83	9.91	58.67
58	E16_Ab	KnownBoundary	0	42.89	18.34	75.04	23.19	48.25	2.87	53.74
59	ER16b	ExonRegion	0	32.33	19.85	50.48	17.06	33.69	4.15	44.04
60	E16a_E17a	KnownJunction	0	26.54	19.18	36.86	15.66	27.62	3.99	39.64
61	ER17a	ExonRegion	0	30.66	19.98	37.60	18.76	27.71	5.09	34.82
62	E17a_E18a	KnownJunction	0	30.49	22.28	27.16	19.45	28.33	6.62	28.82
63	ER18a	ExonRegion	0	29.09	20.90	39.17	19.92	37.09	10.52	37.96
64	E18a_E19a	KnownJunction	0	39.44	24.85	43.08	25.82	42.92	10.00	38.34
65	ER19a	ExonRegion	0	42.57	23.20	36.20	19.85	43.18	13.06	40.99
66	E19_Da	NovelBoundary	0	7.73	10.30	9.33	4.47	1.15	1.26	6.89
67	E19a_E20a	KnownJunction	0	35.13	17.16	36.47	8.59	30.45	6.57	36.67
68	E20_Aa	NovelBoundary	0	6.84	17.02	4.31	15.60	1.18	0.00	8.74
69	ER20a	ExonRegion	0	47.72	30.27	51.60	16.41	49.66	10.66	52.73
70	E20a_E21a	KnownJunction	0	49.29	28.77	43.44	17.28	43.98	13.72	50.80
71	ER21a	ExonRegion	0	34.68	28.93	37.35	18.44	37.86	8.28	41.86
72	E21_Da	NovelBoundary	0	10.00	4.28	15.65	3.01	3.94	0.00	15.84
73	E21a_E22a	KnownJunction	0	18.33	18.71	32.55	8.48	35.16	1.37	33.72
74	E22_Aa	NovelBoundary	0	9.88	10.35	13.81	3.25	2.07	1.21	6.64
75	ER22a	ExonRegion	0	27.57	23.10	27.29	9.50	19.54	4.99	29.33
76	E22_Da	KnownBoundary	1	21.46	20.28	20.38	4.01	9.68	1.66	9.13
77	ER22b	ExonRegion	0	16.02	10.64	23.56	7.45	9.62	3.05	9.93
78	E22_Db	NovelBoundary	1	4.47	10.88	21.22	5.55	6.13	3.51	13.10
79	ER23a	ExonRegion	0	0.00	0.00	0.10	0.18	0.00	0.00	0.00
80	I23	Intron	1	9.50	2.65	17.21	4.84	8.43	1.31	8.76
81	I23_AR1	ActiveIntronRegion	0	11.03	2.93	17.46	5.40	8.21	3.55	7.12
82	I23_AR2	ActiveIntronRegion	1	9.64	1.84	20.31	3.18	8.96	0.65	10.30
83	I23_AR3	ActiveIntronRegion	0	15.48	1.21	19.55	4.99	5.78	2.45	9.44
84	I23_SR3	SilentIntronRegion	1	13.65	1.74	19.51	5.43	10.93	0.91	10.18
85	I23_AR4	ActiveIntronRegion	1	12.80	6.70	22.72	10.50	12.37	2.81	14.62
86	E24_Aa	NovelBoundary	0	19.14	8.59	39.94	13.63	8.41	3.24	15.42
87	ER24a	ExonRegion	0	12.51	4.76	22.41	8.17	13.35	2.82	10.39
88	IG17_AR1	ActiveIntergenicRegion	0	17.69	4.15	27.38	5.17	14.31	1.15	12.36