Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	USP40	Gene	0	82.91	11.82	42.01	7.13	26.37	5.87	85.14
2	251722	Transcript	0	96.95	13.55	52.26	8.42	30.55	5.97	102.44
3	409945	Transcript	0	2.35	0.34	2.11	0.27	0.32	0.32	1.39
4	IG36_AR3	ActiveIntergenicRegion	0	34.31	4.47	28.29	3.94	11.11	4.65	40.55
5	ER1a	ExonRegion	0	28.28	5.78	15.07	2.94	11.61	1.16	31.09
6	E1a_E2a	KnownJunction	0	77.76	14.90	40.45	5.99	23.40	2.92	87.49
7	ER2a	ExonRegion	0	66.03	20.73	47.87	10.29	24.42	5.99	103.49
8	E2a_E3a	KnownJunction	0	70.98	25.72	49.30	11.46	35.13	12.44	104.35
9	ER3a	ExonRegion	0	87.84	25.07	51.05	8.65	32.61	9.03	121.59
10	E3a_E4a	KnownJunction	0	91.58	14.97	46.34	5.47	25.77	12.70	126.66
11	ER4a	ExonRegion	0	110.12	13.07	59.31	5.62	42.88	6.59	134.96
12	E4_Da	NovelBoundary	0	9.91	4.70	14.03	1.68	0.00	4.80	5.49
13	E4a_E5a	KnownJunction	0	117.00	11.03	42.42	2.52	31.44	3.11	109.68
14	I4	Intron	0	14.60	2.54	13.45	1.44	2.01	0.54	7.59
15	I4_SR1	SilentIntronRegion	0	12.77	3.33	12.21	1.74	1.84	0.17	7.77
16	I4_AR1	ActiveIntronRegion	0	12.06	1.77	12.89	0.04	1.42	1.07	7.78
17	I4_SR2	SilentIntronRegion	0	16.69	2.09	14.58	1.54	2.30	0.71	7.40
18	E5_Aa	NovelBoundary	0	22.55	3.68	17.68	7.23	3.07	0.00	16.55
19	ER5a	ExonRegion	0	123.48	14.63	63.59	3.11	35.99	3.64	122.33
20	E5a_E6a	KnownJunction	0	88.69	11.98	47.55	1.52	38.11	3.86	76.59
21	ER6a	ExonRegion	0	83.87	10.78	49.89	3.31	22.98	4.29	76.12
22	E6a_E7a	KnownJunction	0	87.42	15.00	61.55	4.50	21.92	1.37	93.07
23	ER7a	ExonRegion	0	70.98	8.47	54.42	7.78	21.51	4.61	79.86
24	E7a_E8a	KnownJunction	0	48.73	2.60	43.48	4.23	8.85	3.24	63.17
25	E8_Aa	NovelBoundary	1	18.16	0.00	19.89	0.00	0.00	0.00	1.36
26	ER8a	ExonRegion	0	101.05	8.60	66.37	8.99	27.23	7.71	110.19
27	E8a_E9a	KnownJunction	0	107.72	10.40	65.86	5.72	28.06	9.25	111.57
28	ER9a	ExonRegion	0	109.75	13.38	70.72	6.43	29.42	7.93	115.62
29	E9a_E10a	KnownJunction	0	81.38	9.22	52.65	5.50	24.99	2.65	92.24
30	ER10a	ExonRegion	0	96.69	9.99	55.98	9.73	29.20	2.45	96.12
31	E10a_E11a	KnownJunction	0	135.12	12.22	64.78	7.75	46.57	3.86	106.20
32	E11_Aa	NovelBoundary	1	63.77	4.89	30.06	0.00	0.88	0.00	0.85
33	ER11a	ExonRegion	0	88.37	14.49	48.73	5.18	27.41	4.32	89.94
34	E11a_E12a	KnownJunction	0	69.15	8.28	34.01	6.20	23.93	4.61	83.54
35	I11_SR2	SilentIntronRegion	0	7.91	0.89	12.26	0.00	1.54	0.00	4.98
36	E12_Aa	NovelBoundary	1	36.42	2.60	21.25	0.00	2.95	0.00	5.79
37	ER12a	ExonRegion	0	65.37	7.89	42.65	6.04	31.34	7.41	98.66
38	E12a_E13a	KnownJunction	0	61.15	2.47	32.76	7.18	24.94	8.71	81.96
39	ER13a	ExonRegion	0	78.67	9.56	36.07	11.57	24.97	5.46	88.80
40	E13a_E14a	KnownJunction	0	82.43	13.58	39.94	11.54	24.64	4.13	88.08
41	ER14a	ExonRegion	0	62.33	15.23	43.39	10.44	26.82	4.29	110.77
42	E14a_E15a	KnownJunction	0	66.38	13.08	44.06	8.02	23.33	0.00	100.15
43	E15_Aa	NovelBoundary	1	16.36	0.00	12.57	0.00	0.00	0.00	0.75
44	ER15a	ExonRegion	0	93.00	12.82	64.64	9.83	42.24	7.52	111.56
45	E15a_E16a	KnownJunction	0	146.82	14.61	77.17	12.30	49.24	11.26	129.38
46	ER16a	ExonRegion	0	158.89	12.71	85.91	10.60	39.26	7.95	138.75
47	E16a_E17a	KnownJunction	0	127.61	10.32	73.66	5.53	43.80	8.42	125.16
48	ER17a	ExonRegion	0	135.36	14.62	81.69	9.24	46.61	7.11	148.30
49	E17a_E18b	KnownJunction	0	115.19	12.53	70.14	9.13	36.82	2.73	132.11
50	ER18a	ExonRegion	0	3.88	0.46	2.71	0.28	0.63	0.27	1.59
51	E18_Ab	KnownBoundary	0	7.29	1.63	2.70	0.00	1.04	0.00	3.38
52	ER18b	ExonRegion	0	169.34	15.23	94.50	9.95	67.89	7.65	145.34
53	E18a_E19a	KnownJunction	0	185.36	18.36	99.43	11.22	79.39	15.92	140.76
54	ER19a	ExonRegion	0	154.08	14.82	86.72	8.80	52.26	15.91	149.00
55	E19a_E20a	KnownJunction	0	96.02	14.24	86.62	7.88	46.45	16.94	137.94
56	ER20a	ExonRegion	0	104.82	16.75	89.87	7.99	47.23	16.70	152.90
57	E20a_E21a	KnownJunction	0	86.62	12.90	60.93	4.77	53.67	8.79	105.36
58	ER21a	ExonRegion	0	124.88	11.83	84.33	5.35	62.48	15.52	129.86
59	E21a_E22a	KnownJunction	0	125.64	11.06	77.33	7.29	58.90	15.49	125.30
60	ER22a	ExonRegion	0	108.24	17.12	68.89	8.70	54.84	12.08	145.33
61	E22a_E23a	KnownJunction	0	78.28	16.63	66.30	4.28	44.12	13.19	136.11
62	ER23a	ExonRegion	0	73.23	16.57	59.02	8.03	35.98	7.43	122.14
63	E23_Da	KnownBoundary	0	0.63	2.39	1.48	0.00	0.00	0.00	3.21
64	E23a_E24a	KnownJunction	0	64.12	17.37	37.20	11.81	31.95	6.57	102.28
65	ER23b	ExonRegion	0	0.81	0.22	1.51	0.25	0.00	0.37	1.19
66	ER24a	ExonRegion	0	60.68	13.61	32.30	7.64	27.80	2.89	99.80
67	E24a_E25a	KnownJunction	0	63.61	8.59	33.66	6.07	34.46	0.00	98.46
68	ER25a	ExonRegion	0	63.85	11.23	34.47	6.34	25.58	5.53	90.20
69	E25a_E26a	KnownJunction	0	71.98	15.53	35.54	7.61	25.73	8.25	66.38
70	E26_Aa	NovelBoundary	1	34.00	0.00	19.27	0.00	0.00	0.00	3.11
71	ER26a	ExonRegion	0	100.96	14.76	47.93	8.67	33.99	7.23	94.08
72	E26a_E27a	KnownJunction	0	125.73	10.19	47.91	7.61	35.20	7.80	106.88
73	ER27a	ExonRegion	0	156.58	15.89	58.11	12.57	32.53	10.84	94.63
74	E27a_E28a	KnownJunction	0	196.02	25.43	76.44	18.48	32.00	14.66	117.50
75	ER28a	ExonRegion	0	162.78	22.65	77.43	16.30	41.97	7.05	136.38
76	E28a_E29a	KnownJunction	0	141.61	19.44	67.27	22.86	33.45	4.66	131.09
77	ER29a	ExonRegion	0	109.55	22.01	49.13	14.56	22.26	6.45	100.37
78	E29a_E30a	KnownJunction	0	86.57	17.08	42.21	9.32	28.24	3.64	85.01
79	ER30a	ExonRegion	0	114.23	15.72	45.21	10.10	33.74	8.17	104.61