Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ITGA6	Gene	0	194.04	98.76	428.10	395.36	475.74	10.07	1975.32
2	409532	Transcript	0	0.01	0.00	0.00	0.00	1.02	0.00	0.65
3	375221	Transcript	0	0	0	0	0	0	0	0
4	264107	Transcript	0	0	0	0	0	0	0	0
5	264106	Transcript	0	0	0	0	0	0	0	0
6	343713	Transcript	0	0	0	0	0	0	0	0
7	409080	Transcript	0	0	0	0	0	0	0	0
8	ER1a	ExonRegion	0	0.01	0.00	0.00	0.00	0.99	0.00	0.41
9	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	1.04	0.00	0.89
10	ER2a	ExonRegion	0	3.94	27.17	5.06	85.20	9.60	1.75	178.54
11	E2_Ab	KnownBoundary	0	4.24	46.87	12.43	134.13	2.86	1.18	268.57
12	ER2b	ExonRegion	0	17.45	58.84	31.69	181.92	41.28	4.22	378.89
13	E2a_E3a	KnownJunction	1	17.77	56.69	50.96	203.81	44.72	8.87	487.88
14	ER3a	ExonRegion	1	33.83	94.05	81.00	275.37	116.86	6.66	742.67
15	E3a_E4a	KnownJunction	0	57.10	78.50	109.30	343.87	211.99	5.36	1053.99
16	E3a_E5a	NovelJunction	1	5.66	17.10	3.10	41.37	0.00	1.26	0.57
17	E3a_E6a	NovelJunction	1	0.00	1.37	2.60	15.52	0.00	0.00	6.62
18	E3a_E8a	NovelJunction	1	2.52	7.54	2.73	13.57	0.00	0.00	4.67
19	ER4a	ExonRegion	1	56.87	109.82	158.49	387.37	246.62	3.74	1276.17
20	E4a_E5a	KnownJunction	1	60.65	114.04	193.94	377.05	299.62	5.49	1419.96
21	ER5a	ExonRegion	0	130.87	137.88	380.59	496.17	377.46	9.37	1824.66
22	E5a_E6a	KnownJunction	0	145.72	96.81	436.05	456.97	427.31	8.87	1892.36
23	E5a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER6a	ExonRegion	0	138.98	103.93	426.92	474.37	445.02	10.58	2034.03
25	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	11.85
26	E6a_E8a	KnownJunction	0	94.97	102.20	356.17	466.02	362.97	6.73	1880.54
27	ER7a	ExonRegion	0	2.40	4.27	3.17	1.90	2.35	0.02	21.67
28	E7a_E8a	KnownJunction	0	0.58	1.63	2.14	0.00	0.00	0.00	11.21
29	ER8a	ExonRegion	0	97.78	136.65	313.27	504.23	367.78	11.72	2013.15
30	E8a_E9a	KnownJunction	0	80.58	142.10	267.71	488.97	407.51	8.98	1695.36
31	ER9a	ExonRegion	0	205.96	128.64	535.57	509.80	605.81	6.58	2465.10
32	E9a_E10a	KnownJunction	1	401.74	133.80	839.37	606.92	925.34	6.41	2933.77
33	ER10a	ExonRegion	0	453.40	171.47	925.75	762.17	800.65	19.78	3355.65
34	E10a_E11a	KnownJunction	0	482.51	198.14	959.64	884.63	827.53	26.56	3098.38
35	ER11a	ExonRegion	0	421.87	179.39	810.29	715.02	817.60	21.24	3065.19
36	E11a_E12a	KnownJunction	0	256.46	125.81	501.64	465.34	557.42	11.52	1918.46
37	E12_Aa	NovelBoundary	1	100.94	0.97	200.93	4.20	0.00	0.00	2.38
38	ER12a	ExonRegion	0	193.13	107.78	426.26	360.33	446.76	7.21	1798.44
39	E12a_E13a	KnownJunction	0	162.29	95.16	391.09	356.93	492.87	5.95	1910.21
40	ER13a	ExonRegion	0	204.86	98.11	449.41	404.28	555.23	13.82	1896.53
41	E13a_E14a	KnownJunction	1	237.21	96.02	483.72	444.94	591.47	21.52	1810.98
42	I13_AR2	ActiveIntronRegion	1	43.64	12.71	24.38	14.33	10.45	0.00	32.05
43	ER14a	ExonRegion	0	331.33	152.57	653.65	617.73	636.26	19.27	2344.07
44	E14a_E15a	KnownJunction	0	324.45	142.42	639.57	639.68	740.83	16.62	2464.27
45	ER15a	ExonRegion	0	278.48	117.80	568.84	508.25	659.94	9.40	2141.32
46	E15a_E16a	KnownJunction	0	295.53	105.43	572.17	517.14	781.49	11.31	2452.39
47	ER16a	ExonRegion	0	380.32	121.45	748.58	505.52	772.79	13.55	2646.06
48	E16a_E17a	KnownJunction	0	419.02	125.52	744.00	514.16	655.12	7.77	2314.64
49	ER17a	ExonRegion	0	431.30	111.94	742.15	548.15	833.45	12.60	2755.82
50	E17a_E18a	KnownJunction	0	237.08	100.86	509.92	413.95	555.44	12.97	2149.94
51	ER18a	ExonRegion	0	265.06	104.46	554.99	454.10	618.74	12.87	2347.75
52	E18a_E19a	KnownJunction	0	302.29	102.06	650.53	467.65	750.65	14.18	2490.61
53	ER19a	ExonRegion	0	227.25	111.92	580.07	446.27	712.79	14.50	2555.52
54	E19a_E20a	KnownJunction	0	164.73	116.59	511.20	395.18	616.20	12.57	2422.44
55	ER20a	ExonRegion	0	226.29	122.20	562.31	459.33	569.01	13.94	2631.58
56	E20a_E21a	KnownJunction	0	194.89	111.21	492.96	455.43	472.56	11.74	2132.30
57	ER21a	ExonRegion	0	215.24	106.21	543.19	432.76	533.17	9.69	2291.58
58	E21_Da	NovelBoundary	1	101.16	1.10	241.18	4.88	0.99	0.00	3.84
59	E21a_E22a	KnownJunction	1	266.42	98.02	612.58	507.74	757.38	1.34	2939.72
60	E21a_E23a	NovelJunction	0	15.32	11.09	21.07	47.68	8.35	0.00	106.57
61	ER22a	ExonRegion	0	276.63	99.25	599.39	407.50	647.46	6.83	2442.02
62	E22_Da	NovelBoundary	1	124.84	21.25	79.05	96.93	22.57	2.73	21.31
63	E22a_E23a	KnownJunction	0	206.34	105.24	546.63	321.11	512.49	4.72	2472.94
64	I22	Intron	0	60.66	18.88	46.99	47.73	19.12	1.40	24.68
65	I22_AR1	ActiveIntronRegion	0	102.54	28.61	62.14	82.08	26.12	2.49	30.10
66	I22_AR2	ActiveIntronRegion	0	45.00	14.71	39.09	26.35	17.49	0.79	22.69
67	I22_SR2	SilentIntronRegion	0	66.95	23.26	69.48	52.15	19.44	2.01	34.83
68	I22_AR3	ActiveIntronRegion	0	50.55	10.33	44.92	26.78	23.21	0.69	16.92
69	ER23a	ExonRegion	0	272.55	107.44	615.17	376.19	609.68	4.76	2292.69
70	E23a_E24a	KnownJunction	0	246.31	103.67	563.20	410.57	665.70	5.68	2267.69
71	ER24a	ExonRegion	0	195.74	86.39	443.75	356.98	567.33	7.05	2032.90
72	E24a_E25a	KnownJunction	0	168.00	83.15	371.90	373.21	506.36	6.81	1804.70
73	ER25a	ExonRegion	0	147.34	93.41	373.61	394.67	503.78	10.17	2127.65
74	E25a_E26a	KnownJunction	1	134.99	83.83	341.93	385.99	464.86	1.66	2052.22
75	ER26a	ExonRegion	0	162.69	126.24	424.94	468.50	475.74	11.12	2621.34
76	E26a_E27a	KnownJunction	1	80.90	58.16	388.32	282.72	52.81	3.08	2782.93
77	E26a_E28a	KnownJunction	1	114.51	78.97	81.26	270.91	417.99	0.99	52.77
78	ER27a	ExonRegion	1	87.70	64.49	407.88	299.53	60.68	4.87	2929.93
79	E27a_E28a	KnownJunction	1	74.07	54.64	363.28	234.37	27.57	1.66	2497.59
80	ER28a	ExonRegion	0	169.63	110.25	443.90	408.43	463.30	7.05	2286.25
81	E28_Da	KnownBoundary	1	145.17	72.30	353.18	406.12	614.66	9.25	2513.56
82	ER28b	ExonRegion	0	226.31	93.16	456.25	392.80	568.26	13.32	2145.55
83	E28_Db	KnownBoundary	0	2.15	0.00	12.10	6.72	14.22	0.00	49.50
84	ER28c	ExonRegion	0	1.76	0.07	3.58	2.42	6.49	0.00	29.76
85	IG2_AR2	ActiveIntergenicRegion	0	2.21	2.99	0.83	2.16	26.13	1.51	5.37