Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PMS1	Gene	0	39.10	4.19	39.85	3.70	162.28	14.12	35.44
2	374826	Transcript	1	0.00	0.00	2.43	0.00	4.47	0.00	8.91
3	392338	Transcript	0	0.00	0.00	0.00	0.00	0.00	1.23	0.00
4	342075	Transcript	0	0	0	0	0	0	0	0
5	374827	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	409985	Transcript	0	4.40	1.35	3.01	0.70	12.96	0.82	4.93
7	409823	Transcript	0	0	0	0	0	0	0	0
8	409593	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER1a	ExonRegion	0	3.14	1.29	2.36	1.92	2.66	4.89	1.06
10	E1_Ab	KnownBoundary	0	4.14	0.97	3.61	2.82	2.35	7.16	0.89
11	ER1b	ExonRegion	0	3.03	1.33	2.40	3.11	12.18	6.73	3.02
12	E1_Ac	KnownBoundary	0	4.27	1.39	2.30	4.17	21.69	5.92	6.31
13	ER1c	ExonRegion	0	4.59	4.54	6.99	4.43	100.97	7.41	13.98
14	E1_Da	NovelBoundary	0	3.57	2.86	2.16	5.15	2.35	10.26	1.76
15	E1a_E2a	KnownJunction	0	6.28	1.37	11.38	1.68	35.62	6.57	17.80
16	I1_AR3	ActiveIntronRegion	0	5.60	3.64	4.60	3.30	3.88	9.37	3.28
17	I1_AR4	ActiveIntronRegion	0	7.34	3.64	6.17	5.68	4.59	8.72	3.22
18	I1_AR5	ActiveIntronRegion	0	7.43	3.64	6.10	6.23	4.86	8.58	2.70
19	I1_AR6	ActiveIntronRegion	0	4.38	2.42	4.56	4.15	2.56	8.15	1.18
20	ER2a	ExonRegion	0	21.88	4.19	29.94	5.84	79.66	14.00	28.51
21	E2a_E3a	KnownJunction	0	37.75	5.91	60.69	4.28	263.89	16.96	43.71
22	ER3a	ExonRegion	0	37.29	4.63	52.12	5.76	170.10	15.58	45.84
23	E3a_E4a	KnownJunction	0	39.69	4.47	58.52	4.47	164.87	13.19	51.69
24	ER4a	ExonRegion	0	42.09	6.00	50.38	3.67	216.91	13.30	51.03
25	E4_Da	KnownBoundary	0	0.00	0.00	0.65	1.14	6.71	0.00	0.00
26	E4a_E4b	KnownJunction	1	0.00	0.00	2.43	0.00	4.47	0.00	8.91
27	E4a_E5a	KnownJunction	0	49.77	7.36	46.69	3.22	231.45	14.12	42.29
28	ER4b	ExonRegion	0	1.89	0.30	0.85	0.11	6.77	0.70	1.03
29	E4_Ab	KnownBoundary	0	3.42	5.07	3.15	2.90	2.97	0.00	4.03
30	ER4c	ExonRegion	0	12.99	2.69	8.70	2.02	61.11	1.47	14.35
31	E4_Db	KnownBoundary	0	4341.14	2862.19	3491.01	3394.92	1248.56	3911.64	2200.25
32	ER4d	ExonRegion	0	6.91	2.39	5.17	1.29	19.15	0.95	8.82
33	ER5a	ExonRegion	0	57.79	6.85	57.25	6.57	233.04	15.10	51.17
34	E5_Ab	KnownBoundary	0	66.24	5.36	67.40	10.27	372.23	25.57	58.13
35	ER5b	ExonRegion	0	74.93	5.27	73.81	8.16	337.75	20.91	70.28
36	E5a_E6a	KnownJunction	0	68.88	5.88	69.85	6.64	302.20	13.00	71.92
37	E5a_E7a	KnownJunction	0	4.34	0.00	2.01	0.00	22.66	0.00	1.66
38	E5a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	ER6a	ExonRegion	0	87.04	6.01	86.72	5.06	329.78	15.46	72.48
40	E6a_E7a	KnownJunction	0	84.63	2.36	81.09	4.12	341.11	15.44	65.08
41	E6a_E8a	NovelJunction	0	1.95	0.00	3.18	0.00	9.84	0.00	1.26
42	ER7a	ExonRegion	0	117.20	3.72	96.91	9.63	420.14	20.31	66.10
43	E7a_E8a	KnownJunction	0	122.15	4.62	112.42	11.43	396.44	19.32	61.90
44	ER8a	ExonRegion	1	124.02	9.91	105.08	7.20	362.39	19.05	57.04
45	E8a_E9a	KnownJunction	0	103.19	14.55	103.77	3.87	375.09	13.53	55.75
46	ER9a	ExonRegion	0	68.85	7.07	69.14	4.81	250.50	19.63	55.91
47	E9a_E10a	KnownJunction	0	60.23	7.33	60.93	3.03	222.92	25.57	41.56
48	E9a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	ER10a	ExonRegion	0	53.93	5.30	63.10	3.54	228.47	26.93	56.22
50	E10_Da	KnownBoundary	0	35.33	1.47	35.98	1.14	161.76	20.64	31.47
51	ER10b	ExonRegion	0	33.21	0.73	40.94	4.72	166.33	20.60	37.88
52	E10b_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
53	ER11a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.23	0.00
54	ER12a	ExonRegion	0	37.58	4.62	36.88	7.70	246.00	21.39	42.67
55	E12a_E13a	KnownJunction	0	39.92	4.41	42.82	5.28	209.32	9.67	39.15
56	ER13a	ExonRegion	0	43.41	6.80	45.74	5.27	302.21	32.43	57.71
57	E13a_E14a	KnownJunction	0	39.39	6.49	44.06	9.05	260.77	21.04	44.04
58	ER14a	ExonRegion	0	28.49	4.65	30.75	4.35	206.29	30.66	44.60
59	E14_Da	KnownBoundary	1	17.54	0.00	22.04	0.00	123.01	31.11	31.06
60	ER14b	ExonRegion	0	5.34	0.49	8.67	0.50	57.10	12.23	14.38