Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PLEKHB2	Gene	0	159.41	118.15	177.14	165.14	189.29	132.75	302.77
2	409158	Transcript	0	30.46	40.63	29.83	59.45	22.89	29.46	53.85
3	234115	Transcript	1	10.93	42.61	24.24	30.59	15.91	23.45	47.92
4	403716	Transcript	0	0	0	0	0	0	0	0
5	404460	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	409612	Transcript	0	15.65	7.91	14.30	15.74	8.52	11.25	4.81
7	409279	Transcript	0	4.39	2.27	1.37	2.14	1.71	2.00	2.14
8	303908	Transcript	0	0	0	0	0	0	0	0
9	ER1a	ExonRegion	0	4.29	3.23	5.80	4.14	9.85	2.52	8.08
10	E1_Ab	KnownBoundary	1	62.29	62.97	103.54	84.47	225.13	33.61	198.07
11	ER1b	ExonRegion	0	159.36	134.63	205.98	195.33	363.95	115.08	545.58
12	E1_Da	NovelBoundary	1	63.25	4.68	75.07	0.00	0.00	0.00	0.89
13	E1a_E4b	KnownJunction	1	181.80	158.23	248.09	234.77	169.39	146.22	724.38
14	E1a_E5a	NovelJunction	0	4.96	10.69	3.32	4.52	1.82	9.59	1.53
15	ER2a	ExonRegion	0	25.47	10.64	19.55	14.79	16.14	12.00	7.30
16	E2a_E4b	KnownJunction	0	5.82	5.18	9.04	16.69	0.90	10.51	2.32
17	E3_Aa	NovelBoundary	0	1.35	129.15	0.00	151.09	0.00	168.95	0.00
18	ER3a	ExonRegion	0	3.40	2.08	0.59	2.14	0.01	2.12	0.94
19	E3a_E4a	KnownJunction	0	0.78	0.00	0.00	0.00	0.00	0.00	0.87
20	E4_Aa	NovelBoundary	0	2397.83	1849.85	1408.67	1277.51	1724.19	1762.06	1051.68
21	ER4a	ExonRegion	0	9.00	4.71	3.54	4.28	5.11	3.89	4.60
22	E4_Ab	KnownBoundary	0	6.01	2.78	0.83	3.77	0.00	0.00	0.89
23	E4_Ac	KnownBoundary	0	12.43	39.83	27.49	63.18	10.79	42.85	60.79
24	ER4b	ExonRegion	0	143.51	142.90	188.91	213.23	192.54	133.33	537.06
25	ER4c	ExonRegion	1	79.81	116.93	116.87	158.99	47.65	111.74	325.77
26	E4a_E5a	KnownJunction	0	13.80	69.80	29.72	73.71	24.46	54.86	51.74
27	ER5a	ExonRegion	0	131.89	172.73	192.97	248.06	171.98	175.83	446.74
28	E5a_E6a	KnownJunction	0	176.10	149.46	246.05	256.28	489.14	186.87	537.06
29	ER6a	ExonRegion	0	149.47	196.39	205.62	258.11	346.80	200.50	436.99
30	E6a_E7a	KnownJunction	0	116.68	163.72	156.25	212.88	200.84	141.88	357.94
31	E6a_E8a	NovelJunction	0	2.99	14.08	2.47	13.49	0.00	13.67	0.89
32	E6a_E9a	NovelJunction	1	2.84	8.38	3.69	31.43	1.15	25.14	0.00
33	ER7a	ExonRegion	0	156.13	202.76	199.52	254.94	203.13	166.95	468.44
34	E7a_E8a	KnownJunction	0	150.63	180.91	176.64	220.03	220.87	150.32	402.77
35	E7a_E9a	NovelJunction	1	1.02	3.84	2.34	16.55	0.00	2.63	1.71
36	ER8a	ExonRegion	0	170.27	212.78	209.98	239.40	230.34	165.81	493.22
37	E8_Da	NovelBoundary	0	37.14	27.82	33.25	60.47	13.46	24.58	45.96
38	E8a_E9a	KnownJunction	0	105.00	122.95	111.51	109.56	135.94	81.63	311.71
39	E8a_E9b	KnownJunction	1	10.93	42.61	24.24	30.59	15.91	23.45	47.92
40	E8a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	E8b_E9a	KnownJunction	0	27.42	41.43	26.73	51.09	22.80	29.29	47.81
42	E8b_E9b	NovelJunction	1	7.38	8.75	8.39	22.57	6.43	3.97	15.33
43	ER8b	ExonRegion	0	33.49	39.84	32.94	67.80	22.98	29.63	59.90
44	ER9a	ExonRegion	0	129.29	195.90	140.56	188.29	157.72	125.66	372.38
45	ER9b	ExonRegion	0	140.78	225.23	170.37	234.61	231.56	160.69	401.27
46	E9a_E10a	KnownJunction	0	181.09	179.04	207.39	265.84	220.09	188.40	367.07
47	I9_AR5	ActiveIntronRegion	1	39.19	9.02	14.32	6.23	19.09	4.90	16.29
48	I9_AR6	ActiveIntronRegion	1	35.92	7.29	14.11	3.95	18.96	4.90	14.50
49	E10_Aa	NovelBoundary	1	63.52	9.51	22.49	11.84	12.54	5.60	14.30
50	ER10a	ExonRegion	0	191.50	152.80	244.25	200.16	205.81	133.61	365.11
51	E10_Da	KnownBoundary	0	788.98	713.37	761.50	699.49	642.83	643.06	629.09
52	ER10b	ExonRegion	0	330.31	217.87	344.76	320.58	391.42	280.25	591.76
53	I10_AR18	ActiveIntronRegion	0	7.17	1.08	2.48	0.55	81.78	0.40	1.94
54	E11_Aa	NovelBoundary	1	94.31	141.13	94.27	111.83	328.73	150.08	31.19
55	ER11a	ExonRegion	0	0.00	0.36	0.10	0.00	0.00	0.00	0.00
56	E11_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
57	ER11b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00