Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 GRB14 Gene 0 6.95 0.66 20.19 9.43 27.25 0.94 36.97 2 263915 Transcript 0 9.78 0.78 29.09 11.66 40.70 1.15 55.80 3 IG47 Intergenic 0 3.73 1.64 9.43 11.01 0.24 0.57 4.13 4 IG47_AR16 ActiveIntergenicRegion 0 4.69 1.37 17.53 9.20 0.70 1.58 4.89 5 IG47_SR11 SilentIntergenicRegion 0 7.47 1.03 18.58 9.66 0.53 0.86 4.94 6 IG47_AR14 ActiveIntergenicRegion 0 11.32 4.42 25.38 22.84 0.54 1.89 8.13 7 IG47_AR13 ActiveIntergenicRegion 0 2.85 0.45 8.26 12.40 0.86 1.02 2.02 8 IG47_SR10 SilentIntergenicRegion 0 3.07 2.00 11.26 16.33 0.97 1.08 3.92 9 IG47_AR12 ActiveIntergenicRegion 0 7.36 4.87 17.78 28.50 0.53 1.10 7.64 10 IG47_SR6 SilentIntergenicRegion 0 5.21 1.59 11.80 9.20 0.19 0.51 4.80 11 IG47_AR7 ActiveIntergenicRegion 0 5.34 3.84 13.48 33.32 0.27 1.42 9.00 12 IG47_AR6 ActiveIntergenicRegion 0 5.12 3.13 13.08 14.02 0.00 0.69 6.34 13 IG47_SR5 SilentIntergenicRegion 0 5.82 2.12 13.32 15.65 0.44 0.91 6.62 14 IG47_AR5 ActiveIntergenicRegion 0 10.85 3.67 30.61 52.17 0.42 2.31 9.76 15 IG47_SR4 SilentIntergenicRegion 0 4.62 1.88 14.12 22.26 0.20 0.91 4.63 16 IG47_SR3 SilentIntergenicRegion 0 2.24 1.85 5.80 8.71 0.24 0.31 3.85 17 IG47_AR3 ActiveIntergenicRegion 0 1.09 1.25 4.37 9.34 0.29 1.17 6.04 18 IG47_SR2 SilentIntergenicRegion 0 1.25 1.02 5.45 8.44 0.25 0.48 3.69 19 ER1a ExonRegion 0 0.63 0.11 0.85 0.69 1.50 0.00 2.26 20 E1a_E2a KnownJunction 0 5.84 0.00 12.46 1.46 23.01 0.00 18.13 21 ER2a ExonRegion 0 9.66 2.63 29.01 19.48 31.51 1.16 45.72 22 E2a_E3a KnownJunction 0 8.55 4.89 30.87 15.52 23.72 2.36 51.34 23 ER3a ExonRegion 0 12.83 1.93 31.82 15.90 45.11 2.27 58.02 24 E3a_E4a KnownJunction 0 18.69 0.00 44.03 11.97 38.73 1.66 66.50 25 ER4a ExonRegion 0 12.86 0.00 39.65 10.77 35.31 1.68 60.53 26 E4a_E5a KnownJunction 0 19.59 0.00 47.78 8.34 35.25 1.47 64.41 27 ER5a ExonRegion 0 13.99 0.00 36.80 8.94 47.79 0.92 57.15 28 E5a_E6a KnownJunction 0 4.59 0.00 19.16 9.51 36.75 1.66 39.38 29 ER6a ExonRegion 0 7.88 0.51 24.27 13.15 25.62 0.39 45.25 30 E6a_E7a KnownJunction 0 9.00 1.29 26.86 15.85 23.42 0.00 53.00 31 ER7a ExonRegion 0 6.00 1.03 19.27 8.72 28.96 0.00 46.19 32 E7_Da NovelBoundary 1 3.22 2.42 14.83 6.42 3.60 0.00 0.82 33 E7a_E8a KnownJunction 1 1.70 0.00 4.34 2.87 28.82 0.00 33.72 34 I7 Intron 0 0.31 0.97 9.15 0.50 3.88 0.00 3.75 35 I7_AR1 ActiveIntronRegion 0 0.31 0.98 9.24 0.50 3.91 0.00 3.79 36 E8_Aa NovelBoundary 1 6.58 0.00 15.26 14.36 6.11 0.00 4.00 37 ER8a ExonRegion 0 3.76 0.00 13.92 7.79 26.94 0.00 42.72 38 E8_Da NovelBoundary 0 0.00 0.00 9.87 0.00 2.21 0.00 2.81 39 E8a_E9a KnownJunction 0 3.79 0.00 11.98 6.15 33.24 0.00 46.88 40 I8 Intron 0 2.41 0.38 11.43 1.51 5.14 0.02 3.78 41 I8_SR1 SilentIntronRegion 0 2.92 0.56 13.50 0.82 3.45 0.00 4.58 42 I8_AR1 ActiveIntronRegion 0 2.13 0.28 10.23 1.86 3.87 0.00 2.37 43 I8_SR2 SilentIntronRegion 0 2.12 0.28 10.24 1.92 6.44 0.04 3.45 44 E9_Aa NovelBoundary 1 3.52 1.05 12.85 2.90 10.86 0.00 2.88 45 ER9a ExonRegion 0 4.44 0.01 16.78 11.53 44.18 0.02 60.07 46 E9a_E10a KnownJunction 0 7.86 0.00 26.14 17.53 42.67 0.00 69.15 47 I9_SR2 SilentIntronRegion 0 1.87 0.32 10.31 0.81 3.40 0.00 2.12 48 I9_SR3 SilentIntronRegion 0 1.54 0.77 9.36 1.00 4.37 0.00 2.14 49 ER10a ExonRegion 0 11.67 1.28 39.06 12.25 67.52 0.94 70.49 50 E10a_E11a KnownJunction 0 12.77 1.55 50.25 13.60 66.07 1.26 92.49 51 ER11a ExonRegion 0 12.69 0.83 46.82 17.88 59.78 2.94 92.63 52 E11a_E12a KnownJunction 0 14.60 1.39 36.76 18.02 64.71 4.66 70.58 53 ER12a ExonRegion 0 13.12 0.92 39.50 14.31 63.28 2.26 76.89 54 E12a_E13a KnownJunction 0 11.73 1.16 48.17 13.98 80.43 1.55 88.22 55 ER13a ExonRegion 0 13.99 0.81 36.67 15.59 53.81 0.44 65.33 56 E13a_E14a KnownJunction 0 13.64 0.00 30.39 9.24 46.66 1.02 58.64 57 ER14a ExonRegion 0 8.10 0.76 21.74 13.65 24.15 2.31 30.88