Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 R3HDM1 Gene 0 41.35 7.35 63.62 14.13 195.44 7.08 134.14 2 409478 Transcript 0 1.42 0.00 3.54 0.00 17.94 1.23 3.32 3 264160 Transcript 0 0 0 0 0 0 0 0 4 329971 Transcript 0 0 0 0 0 0 0 0 5 410054 Transcript 0 0.29 0.51 0.69 0.40 2.53 0.00 2.33 6 409606 Transcript 0 0 0 0 0 0 0 0 7 ER1a ExonRegion 0 1.42 0.00 3.54 0.00 17.94 1.23 3.32 8 ER1b ExonRegion 0 5.65 0.13 11.40 3.48 33.06 1.62 21.88 9 E1a_E3a KnownJunction 1 2.52 1.16 8.44 4.61 6.92 4.18 22.53 10 ER2a ExonRegion 0 0.11 1.54 1.19 0.58 1.93 0.00 2.59 11 E2_Ab KnownBoundary 0 0.97 1.08 0.00 1.11 2.86 0.00 3.53 12 ER2b ExonRegion 0 0.53 2.36 0.84 1.17 0.75 0.34 1.12 13 E2a_E3a KnownJunction 0 0.00 1.00 1.37 0.00 0.00 1.34 0.00 14 ER3a ExonRegion 0 16.45 4.20 32.32 12.12 79.84 5.86 69.03 15 E3a_E4a KnownJunction 0 40.89 5.36 56.78 12.06 102.15 3.97 96.32 16 E3a_E7a KnownJunction 0 0.00 0.00 0.89 0.00 0.00 0.00 0.00 17 ER4a ExonRegion 0 49.57 10.28 79.51 14.01 133.38 5.89 129.88 18 E4a_E5a KnownJunction 0 4.29 2.71 13.58 0.00 1.18 0.00 14.19 19 E4a_E6a NovelJunction 0 15.42 5.46 30.15 5.55 26.44 0.00 25.12 20 E4a_E7a KnownJunction 0 46.01 9.06 52.60 5.66 148.44 5.95 102.58 21 ER5a ExonRegion 1 3.84 1.59 17.05 2.08 2.29 0.76 17.81 22 E5a_E6a KnownJunction 1 1.87 1.16 20.62 3.77 3.37 1.53 18.67 23 ER6a ExonRegion 1 12.54 4.48 47.19 3.45 33.31 1.72 28.90 24 E6a_E7a KnownJunction 1 22.68 1.63 53.77 2.52 19.80 0.00 21.14 25 ER7a ExonRegion 0 77.48 13.79 129.10 10.67 252.05 10.60 145.92 26 E7a_E8a KnownJunction 0 115.34 7.07 174.43 6.77 246.27 9.89 155.80 27 ER8a ExonRegion 0 111.20 7.27 151.73 13.07 258.65 13.39 158.15 28 E8a_E9a KnownJunction 0 91.54 2.39 137.75 16.85 241.41 10.77 139.47 29 ER9a ExonRegion 0 129.67 7.15 207.79 23.59 333.36 8.64 206.92 30 E9a_E10a KnownJunction 0 127.36 9.14 187.04 17.99 444.18 4.07 185.51 31 ER10a ExonRegion 0 72.93 9.85 118.28 10.75 256.41 4.83 150.97 32 E10a_E11a KnownJunction 0 60.55 9.59 94.40 13.19 198.12 6.83 130.69 33 ER11a ExonRegion 0 51.04 10.15 99.48 17.31 253.23 9.28 185.71 34 E11a_E12a KnownJunction 0 37.17 11.38 101.07 20.02 188.13 3.08 204.64 35 ER12a ExonRegion 0 41.86 12.95 114.51 18.91 221.61 11.00 209.57 36 E12a_E13a KnownJunction 0 39.00 13.37 102.96 15.58 244.75 4.21 156.99 37 ER13a ExonRegion 0 49.52 14.26 128.20 23.40 236.99 10.32 233.34 38 E13a_E14a KnownJunction 0 42.96 10.51 91.06 22.49 220.85 11.95 184.98 39 ER14a ExonRegion 0 42.76 9.17 107.45 23.64 219.63 10.17 200.58 40 E14a_E15a KnownJunction 0 34.18 2.47 82.21 16.63 240.12 5.17 158.35 41 ER15a ExonRegion 0 50.38 10.81 92.19 16.27 265.48 9.95 182.72 42 E15a_E16a KnownJunction 0 15.44 3.99 32.58 10.24 73.93 4.23 21.38 43 E15a_E17a KnownJunction 0 31.99 7.99 33.86 9.70 191.18 0.00 134.30 44 ER16a ExonRegion 1 7.27 2.65 33.11 9.91 28.95 4.45 11.03 45 E16a_E17a KnownJunction 1 4.09 2.26 20.45 9.73 20.98 1.02 3.25 46 ER17a ExonRegion 0 33.76 16.54 63.23 21.55 299.89 8.33 191.49 47 E17a_E18a KnownJunction 1 16.74 4.81 17.42 13.84 90.69 7.99 109.39 48 E17a_E18b KnownJunction 1 5.64 2.73 21.61 1.63 58.67 0.00 49.54 49 ER18a ExonRegion 1 19.40 8.50 22.52 14.03 107.10 7.97 120.92 50 ER18b ExonRegion 1 18.00 7.77 23.89 19.20 165.79 8.90 126.99 51 E18a_E19a KnownJunction 1 15.10 8.80 22.49 23.41 161.90 16.78 118.75 52 ER19a ExonRegion 0 28.70 6.87 39.00 14.43 203.31 12.49 141.96 53 E19a_E20a KnownJunction 0 48.05 5.15 58.83 18.50 282.42 12.68 158.23 54 E20_Aa NovelBoundary 1 15.61 0.00 24.20 0.00 0.00 0.00 3.14 55 ER20a ExonRegion 0 48.30 7.09 66.47 17.99 304.27 7.29 186.37 56 E20a_E21a KnownJunction 0 62.69 5.10 82.49 21.94 365.78 4.93 181.32 57 ER21a ExonRegion 0 44.20 10.04 75.21 22.85 333.76 6.59 236.60 58 E21a_E22a KnownJunction 0 43.88 6.96 55.77 11.54 230.48 7.56 229.19 59 ER22a ExonRegion 0 46.82 9.08 63.57 20.79 395.61 9.90 232.59 60 E22a_E23a KnownJunction 0 43.46 6.78 64.94 18.10 251.23 8.60 210.41 61 ER23a ExonRegion 0 39.06 11.52 60.50 16.61 293.87 8.69 228.98 62 E23a_E24a KnownJunction 0 48.32 10.48 70.00 9.73 479.13 4.88 244.55 63 ER24a ExonRegion 0 31.42 5.71 55.19 13.37 279.52 5.85 189.86 64 E24a_E25a KnownJunction 0 23.22 4.02 40.32 11.68 161.09 2.28 154.09 65 ER25a ExonRegion 1 19.06 7.79 47.65 19.71 167.76 6.82 147.02 66 E25a_E26a KnownJunction 0 25.47 5.54 56.52 19.78 170.36 2.84 150.14 67 ER26a ExonRegion 0 44.62 7.35 74.19 18.82 286.08 4.08 193.01 68 E26a_E27a KnownJunction 0 62.57 7.20 92.10 11.97 279.40 3.19 241.14 69 ER27a ExonRegion 0 66.67 6.33 79.83 16.95 282.30 3.58 203.57 70 E27_Da KnownBoundary 0 78.66 7.70 64.21 14.87 207.01 7.72 92.58 71 ER27b ExonRegion 0 51.77 6.26 58.62 12.57 176.48 9.47 100.03 72 ER27c ExonRegion 0 0.77 0.00 0.00 0.62 5.67 0.00 4.38