Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC018892.8	Gene	0	33.12	56.38	5.08	2.60	7.38	6.52	11.01
2	289105	Transcript	0	56.43	100.42	6.19	3.81	5.82	7.34	15.38
3	408944	Transcript	1	11.65	4.45	0.68	0.00	2.56	2.25	0.00
4	ER1a	ExonRegion	0	4.41	33.89	1.23	2.43	2.12	9.59	3.88
5	E1_Ab	KnownBoundary	0	23.53	114.10	2.74	3.03	6.18	14.95	16.29
6	ER1b	ExonRegion	0	27.15	90.56	7.32	5.60	11.03	17.31	22.21
7	E1a_E2a	KnownJunction	0	54.38	319.75	9.64	10.38	12.75	32.27	19.25
8	ER2a	ExonRegion	0	35.67	168.57	7.63	7.58	9.08	18.11	21.38
9	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER3a	ExonRegion	0	34.79	77.40	5.64	4.92	12.82	10.72	16.50
11	E3a_E4a	KnownJunction	0	4.09	20.96	1.95	0.00	5.16	0.00	11.88
12	E3_Db	NovelBoundary	0	34.72	25.96	3.82	1.63	10.65	3.94	5.23
13	ER3b	ExonRegion	1	11.65	4.45	0.68	0.00	2.56	2.25	0.00
14	ER4a	ExonRegion	0	43.21	50.05	4.18	0.63	4.51	3.78	10.38
15	E4a_E5a	KnownJunction	1	253.52	279.08	13.78	16.55	13.30	17.69	17.04
16	ER5a	ExonRegion	1	93.73	46.82	5.70	0.20	5.25	3.78	13.13
17	E5a_E6a	KnownJunction	0	13.92	165.04	2.89	9.81	4.47	3.27	9.66
18	ER6a	ExonRegion	0	10.09	9.65	1.97	0.00	2.94	0.00	6.55
19	E6_Da	NovelBoundary	0	11.77	8.28	3.79	1.60	0.95	0.00	0.87
20	E6a_E7a	KnownJunction	1	113.24	171.26	4.47	7.26	6.34	6.81	18.27
21	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER7a	ExonRegion	0	4.83	2.49	0.00	0.00	1.47	0.00	3.15
23	I7_AR2	ActiveIntronRegion	0	23.50	23.76	3.95	0.00	1.62	0.00	3.87
24	I7_AR4	ActiveIntronRegion	0	31.78	52.94	5.29	1.23	2.73	4.74	5.93
25	I7_AR7	ActiveIntronRegion	0	4.45	1.21	0.00	0.00	7.63	0.00	0.43
26	I7_AR11	ActiveIntronRegion	0	15.49	1.16	1.64	0.00	8.99	0.00	0.63
27	I7_AR12	ActiveIntronRegion	0	15.45	1.20	2.09	0.00	5.31	0.81	1.07
28	I7_SR13	SilentIntronRegion	1	36.53	11.38	2.06	0.12	4.01	1.86	1.15
29	E8_Aa	NovelBoundary	0	2967.52	1728.95	2577.33	2107.55	2709.31	1554.65	2068.75
30	ER8a	ExonRegion	1	21.81	13.10	3.73	1.37	7.25	0.75	1.81
31	E8_Da	NovelBoundary	0	330.16	304.67	208.87	407.04	117.20	318.09	197.72
32	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	I8	Intron	0	45.51	58.70	5.07	1.16	6.03	4.98	6.12
34	I8_AR1	ActiveIntronRegion	0	45.98	59.36	5.12	1.17	6.09	5.02	6.20
35	E9a_E10a	KnownJunction	0	45.75	59.90	3.52	2.11	2.24	4.18	14.85
36	ER9a	ExonRegion	0	12.35	19.81	1.24	0.47	0.78	0.97	6.02
37	I9	Intron	0	23.39	16.19	2.63	0.55	5.80	1.83	1.96
38	I9_SR1	SilentIntronRegion	0	30.26	18.27	1.09	2.29	3.92	2.10	1.48
39	I9_AR1	ActiveIntronRegion	0	41.35	51.52	4.09	1.21	9.53	7.32	5.22
40	I9_SR2	SilentIntronRegion	1	37.86	23.75	4.04	0.00	6.38	1.87	1.64
41	I9_AR2	ActiveIntronRegion	0	26.54	18.70	2.93	0.70	7.00	2.15	2.55
42	E10a_E11a	KnownJunction	0	146.55	293.98	17.39	6.18	16.23	16.19	52.11
43	ER10a	ExonRegion	0	63.75	105.53	9.23	1.25	9.49	4.02	24.03
44	ER11a	ExonRegion	0	110.98	241.41	18.22	5.91	13.75	18.88	45.22
45	E11a_E12a	KnownJunction	0	97.34	251.00	18.74	7.12	13.90	26.21	37.76
46	E12a_E13a	KnownJunction	0	260.65	469.94	24.16	22.54	11.80	37.20	60.99
47	ER12a	ExonRegion	0	60.97	149.01	12.78	5.12	9.86	14.88	24.66
48	I12_SR2	SilentIntronRegion	1	16.45	7.61	0.59	0.19	0.61	0.31	0.41
49	I12_AR8	ActiveIntronRegion	1	14.47	4.78	0.68	0.00	0.00	1.23	0.00
50	I12_SR15	SilentIntronRegion	1	15.35	9.79	0.00	0.00	0.00	0.00	0.04
51	I12_AR15	ActiveIntronRegion	0	11.12	9.50	0.00	0.00	0.00	0.00	1.29
52	ER13a	ExonRegion	0	18.35	42.57	2.37	1.66	3.83	4.33	9.65
53	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
54	ER14a	ExonRegion	0	4.50	28.99	0.00	2.49	3.46	3.30	1.93
55	ER15a	ExonRegion	0	12.79	29.76	3.26	1.32	5.17	4.18	5.90
56	E15_Da	NovelBoundary	0	15.99	10.85	0.66	1.60	8.71	1.66	2.26
57	I15	Intron	1	33.55	10.41	1.55	0.24	5.37	1.31	2.19
58	I15_SR1	SilentIntronRegion	0	33.59	10.42	1.55	0.24	5.37	1.31	2.19
59	ER16a	ExonRegion	0	14.04	26.28	3.88	0.83	2.29	3.56	5.73