Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	GCC2	Gene	0	179.80	91.11	85.03	32.46	113.36	48.51	43.36
2	393321	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	309863	Transcript	0	0	0	0	0	0	0	0
4	409821	Transcript	0	3.09	5.54	2.42	0.00	6.50	0.00	0.00
5	409325	Transcript	0	2.79	0.00	0.65	0.00	0.00	1.39	0.00
6	409896	Transcript	0	0.26	0.82	0.46	0.40	0.74	0.01	0.46
7	393318	Transcript	0	0	0	0	0	0	0	0
8	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER1b	ExonRegion	0	2.14	2.48	0.62	2.03	4.34	0.34	1.49
10	E1_Ac	KnownBoundary	0	3.22	0.00	3.77	1.52	4.43	0.00	0.00
11	E1_Ad	KnownBoundary	0	22.70	20.89	19.41	8.94	16.11	2.47	11.22
12	ER1c	ExonRegion	1	11.61	22.81	5.19	8.59	15.48	4.36	5.55
13	ER1d	ExonRegion	1	33.00	50.23	16.49	15.65	32.03	7.20	11.77
14	E1a_E2a	KnownJunction	1	56.76	65.94	26.15	21.05	30.66	10.40	16.21
15	E1b_E2a	KnownJunction	0	2.17	5.81	2.36	0.00	6.34	0.00	0.00
16	ER1e	ExonRegion	0	4.01	5.26	2.48	0.00	6.66	0.00	0.00
17	ER2a	ExonRegion	1	46.93	49.96	24.26	13.80	25.45	11.89	12.51
18	E2a_E4a	KnownJunction	0	28.21	35.41	17.27	10.67	9.18	13.11	7.54
19	E2a_E5a	KnownJunction	0	2.79	0.00	0.65	0.00	0.00	1.39	0.00
20	ER3a	ExonRegion	0	0.53	1.64	0.93	0.81	1.49	0.02	0.92
21	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER4a	ExonRegion	0	73.05	93.57	46.53	31.07	19.39	23.32	21.94
23	E4a_E5a	KnownJunction	0	163.76	116.93	90.22	46.76	32.20	45.26	45.01
24	ER5a	ExonRegion	0	170.08	125.54	86.93	46.14	31.85	47.00	46.55
25	ER5b	ExonRegion	0	181.35	116.48	90.17	44.01	48.64	49.11	48.65
26	ER5c	ExonRegion	0	168.00	113.92	79.48	39.57	104.77	43.63	41.95
27	E5b_E6a	KnownJunction	0	132.58	118.35	66.75	41.77	118.72	36.02	29.26
28	ER6a	ExonRegion	0	161.90	114.28	82.55	45.28	78.75	57.60	37.11
29	E6a_E7a	KnownJunction	0	226.95	118.35	114.56	39.04	94.24	45.93	40.69
30	E6a_E9a	NovelJunction	1	2.95	15.82	0.00	0.00	2.07	1.31	0.00
31	ER7a	ExonRegion	0	203.97	98.59	98.17	39.70	79.35	46.31	38.83
32	E7_Da	KnownBoundary	0	141.60	62.50	88.08	40.99	55.35	38.22	32.42
33	ER7b	ExonRegion	0	214.84	76.99	115.03	31.14	89.12	33.81	38.81
34	E7b_E8a	KnownJunction	0	226.30	47.42	105.92	15.20	108.03	29.53	35.64
35	ER8a	ExonRegion	0	165.10	57.68	88.16	18.24	84.59	28.30	36.91
36	E8a_E9a	KnownJunction	0	125.78	48.08	70.53	12.73	74.88	21.98	25.44
37	I8_AR2	ActiveIntronRegion	0	50.42	17.36	21.15	9.03	15.44	5.53	4.70
38	ER9a	ExonRegion	0	184.97	72.37	94.18	21.24	112.22	42.10	55.77
39	E9a_E10a	KnownJunction	0	194.92	96.28	92.89	27.58	132.92	52.10	51.89
40	ER10a	ExonRegion	0	160.65	82.94	85.15	22.74	100.68	33.68	46.11
41	E10a_E11a	KnownJunction	0	140.63	63.39	72.77	28.15	93.04	23.02	47.01
42	ER11a	ExonRegion	0	157.96	92.43	82.42	31.74	121.46	32.96	53.65
43	E11a_E12a	KnownJunction	0	161.41	99.10	76.48	22.11	103.83	31.38	33.66
44	ER12a	ExonRegion	0	159.29	103.46	89.85	33.43	118.13	49.05	52.41
45	E12a_E13a	KnownJunction	0	173.31	92.29	71.59	17.91	144.20	39.77	33.23
46	E12a_E14a	NovelJunction	0	11.88	9.33	13.64	7.53	1.18	9.46	0.83
47	ER13a	ExonRegion	0	197.90	93.73	100.08	28.73	135.29	52.55	58.10
48	E13a_E14a	KnownJunction	0	192.80	108.32	104.52	26.58	134.58	59.42	51.59
49	ER14a	ExonRegion	0	241.84	95.65	113.20	29.83	142.88	53.39	58.79
50	E14a_E15a	KnownJunction	0	287.47	108.26	110.77	42.59	187.07	63.94	54.26
51	ER15a	ExonRegion	0	270.57	125.84	114.07	36.32	168.88	77.13	65.43
52	E15a_E16a	KnownJunction	0	173.32	130.49	79.15	45.24	137.81	74.72	56.94
53	ER16a	ExonRegion	0	142.63	102.90	64.73	30.20	149.40	51.48	51.74
54	E16a_E17a	KnownJunction	0	167.90	70.33	66.03	19.10	177.00	44.43	47.32
55	ER17a	ExonRegion	0	151.50	103.75	66.72	26.99	156.42	53.14	54.32
56	E17a_E18a	KnownJunction	0	129.73	81.55	46.44	21.62	156.55	33.18	41.85
57	E17a_E19a	NovelJunction	0	10.31	23.38	8.22	9.59	0.90	18.09	2.54
58	ER18a	ExonRegion	0	151.15	101.98	66.87	26.31	168.23	45.15	62.02
59	E18a_E19a	KnownJunction	0	209.88	110.79	80.95	33.92	178.84	32.13	53.44
60	ER19a	ExonRegion	0	236.13	150.31	93.32	37.06	255.80	65.21	72.96
61	E19a_E20a	KnownJunction	0	313.27	173.65	104.62	43.05	225.11	97.77	86.69
62	ER20a	ExonRegion	0	207.31	173.91	85.45	51.93	248.94	112.35	69.15
63	E20a_E21a	KnownJunction	1	96.22	151.32	57.80	40.83	132.67	71.26	49.14
64	E21_Aa	NovelBoundary	1	51.52	45.34	64.05	37.28	3.09	62.31	17.70
65	ER21a	ExonRegion	0	139.80	174.77	97.12	72.46	155.46	114.81	67.56
66	E21_Da	NovelBoundary	0	37.57	22.41	36.29	27.61	4.26	28.51	20.04
67	E21a_E22a	KnownJunction	0	83.82	116.22	49.98	45.22	106.00	34.84	57.86
68	ER22a	ExonRegion	0	131.37	125.35	57.45	35.25	131.08	55.01	53.65
69	E22a_E23a	KnownJunction	0	110.09	88.59	37.79	28.82	104.66	38.11	41.53
70	ER23a	ExonRegion	0	208.06	202.57	89.56	90.62	150.66	99.00	53.28
71	E23a_E24a	KnownJunction	1	179.77	94.16	75.07	18.61	132.99	58.53	42.54
72	ER24a	ExonRegion	0	161.76	71.75	59.58	24.64	116.96	51.32	38.45
73	ER24b	ExonRegion	0	3.84	2.43	3.39	0.00	4.05	0.00	2.70