Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 GLI2 Gene 0 0.09 0.14 0.40 0.41 83.20 6.02 0.10 2 314490 Transcript 0 0.00 0.00 0.00 0.00 47.83 4.56 0.00 3 361492 Transcript 0 0.06 0.03 0.20 0.18 54.93 3.42 0.04 4 360874 Transcript 0 0.00 0.00 0.00 0.00 1.08 0.00 0.00 5 341310 Transcript 0 0.00 0.00 0.00 0.00 2.22 0.36 0.00 6 IG45_AR4 ActiveIntergenicRegion 0 0.00 0.00 0.03 0.00 10.32 1.16 0.66 7 ER1a ExonRegion 0 0.00 0.00 1.29 0.00 10.50 0.71 0.00 8 E1_Ab KnownBoundary 0 0.00 0.00 1.77 0.00 24.92 4.21 0.00 9 ER1b ExonRegion 0 0.00 0.00 0.62 0.00 36.87 2.02 0.35 10 E1a_E2a KnownJunction 0 0.00 0.00 1.54 0.00 48.36 4.90 0.00 11 ER2a ExonRegion 0 0.00 0.00 0.68 0.00 40.36 3.33 0.00 12 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 32.46 1.29 0.00 13 E2a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 1.18 0.00 0.00 14 ER3a ExonRegion 0 0.00 0.45 0.00 0.00 43.90 4.86 0.25 15 E3a_E4a KnownJunction 0 0.00 0.00 0.69 0.00 30.27 0.00 0.00 16 ER4a ExonRegion 0 0.00 0.50 0.22 0.00 39.81 1.55 0.00 17 E4a_E5a KnownJunction 0 0.00 0.00 0.68 0.00 29.46 0.00 0.00 18 ER5a ExonRegion 0 0.00 1.41 0.56 0.00 62.63 2.25 0.00 19 E5a_E6a KnownJunction 0 0.00 3.02 0.00 1.30 98.99 0.00 0.00 20 E5a_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.99 0.00 0.00 21 ER6a ExonRegion 0 0.00 2.43 0.00 0.00 87.46 1.63 0.00 22 ER6b ExonRegion 0 0.00 1.38 0.09 0.00 60.30 2.99 0.00 23 E6_Da KnownBoundary 0 0.00 0.00 0.55 0.00 64.16 6.59 0.00 24 ER6c ExonRegion 0 0.00 0.00 0.56 1.04 77.00 7.63 0.00 25 E6_Ac KnownBoundary 0 0.00 0.00 0.80 1.03 103.99 2.73 0.00 26 ER6d ExonRegion 0 0.00 0.00 0.39 0.10 76.63 0.98 0.00 27 E6b_E7a KnownJunction 0 0.00 0.00 0.89 0.00 98.02 2.71 0.00 28 ER7a ExonRegion 0 0.00 0.00 0.60 0.77 70.00 2.83 0.00 29 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 E7a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 11.64 0.00 0.00 31 E7a_E9c KnownJunction 0 0.00 0.00 0.00 0.00 47.83 4.56 0.00 32 E8a_E9b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER9a ExonRegion 0 0.00 0.00 0.00 0.00 10.18 1.23 0.00 35 ER9b ExonRegion 0 0.00 0.00 0.00 0.00 13.50 1.49 0.00 36 E9_Da KnownBoundary 0 0.00 0.00 0.00 0.00 3.94 1.50 0.00 37 E9a_E9c KnownJunction 0 0.00 0.00 0.00 0.00 8.88 1.45 0.00 38 E9_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 7.52 1.13 0.00 39 ER9c ExonRegion 0 0.00 0.00 0.00 0.00 34.28 3.68 0.00 40 ER9d ExonRegion 0 0.00 0.00 1.54 0.41 84.01 7.05 0.20 41 E9b_E10a KnownJunction 0 0.00 0.00 0.00 1.68 111.00 9.00 0.89 42 ER10a ExonRegion 0 0.38 0.00 0.96 0.78 112.46 7.05 0.64 43 E10a_E11a KnownJunction 0 0.00 0.00 0.59 1.22 95.07 4.98 0.89 44 ER11a ExonRegion 0 0.35 0.00 0.07 1.25 95.56 4.50 0.49 45 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 118.61 6.89 0.00 46 ER12a ExonRegion 0 0.00 0.00 0.00 0.30 70.76 3.24 0.00 47 E12a_E13a KnownJunction 0 0.00 0.00 0.00 1.14 21.62 1.15 0.00 48 ER13a ExonRegion 0 0.00 0.00 0.00 0.32 42.59 5.15 0.00 49 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 31.47 6.08 0.00 50 ER14a ExonRegion 0 0.00 0.16 0.06 0.08 22.04 3.62 0.00 51 E14_Da KnownBoundary 0 0.00 0.00 0.00 0.00 86.66 9.41 0.00 52 ER14b ExonRegion 0 0.03 0.00 0.29 0.49 80.60 8.91 0.02 53 ER14c ExonRegion 0 0.00 0.00 0.00 1.25 52.05 2.37 0.67 54 ER14d ExonRegion 0 0.00 0.00 0.00 0.31 48.84 2.80 0.06 55 E14_Dc KnownBoundary 0 0.00 0.00 0.00 0.00 49.59 2.57 0.00 56 ER14e ExonRegion 0 0.25 0.12 0.78 0.71 163.61 8.78 0.16 57 IG46_AR1 ActiveIntergenicRegion 0 0.00 0.00 0.27 0.50 66.22 2.94 0.00