Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MARCO	Gene	0	23.48	32.78	0.61	0.88	0.00	2.67	3.49
2	327097	Transcript	0	55.07	51.94	1.09	0.98	0.00	3.96	2.93
3	410021	Transcript	0	0	0	0	0	0	0	0
4	ER1a	ExonRegion	0	0.00	1.88	0.00	0.00	0.00	0.00	0.00
5	E1_Ab	KnownBoundary	0	0.00	5.83	0.00	0.00	0.00	0.00	0.00
6	ER1b	ExonRegion	0	0.38	2.67	0.00	0.00	0.00	0.00	0.00
7	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	E2_Aa	NovelBoundary	0	0.95	15.50	0.00	0.00	0.00	0.00	0.00
9	ER2a	ExonRegion	0	3.40	6.82	0.00	0.76	0.00	0.00	1.01
10	E2_Da	NovelBoundary	0	1.77	15.63	0.00	0.00	0.00	0.00	1.32
11	E2a_E3a	KnownJunction	0	0.00	2.65	0.00	1.22	0.00	0.00	0.00
12	I2	Intron	0	4.00	21.97	0.20	0.56	0.00	0.00	0.78
13	I2_SR1	SilentIntronRegion	0	4.01	22.02	0.20	0.56	0.00	0.00	0.78
14	E3_Aa	NovelBoundary	0	2.75	12.03	0.00	0.00	0.00	0.00	0.54
15	ER3a	ExonRegion	0	1.86	13.07	0.00	0.37	0.00	0.00	0.99
16	E3_Da	NovelBoundary	0	2.49	16.92	0.68	0.00	0.00	2.87	1.36
17	E3a_E4a	KnownJunction	0	0.00	2.65	0.00	1.49	0.00	0.00	0.00
18	I3	Intron	0	0.80	8.75	0.31	0.41	0.00	0.48	0.53
19	I3_SR2	SilentIntronRegion	0	0.82	8.96	0.31	0.42	0.00	0.50	0.55
20	ER4a	ExonRegion	0	0.81	3.78	0.00	0.83	0.00	0.00	2.02
21	E4a_E5a	KnownJunction	0	0.97	2.89	0.00	0.00	0.00	0.00	2.57
22	ER5a	ExonRegion	0	7.23	12.92	0.24	0.00	0.00	1.63	2.79
23	E5a_E6a	KnownJunction	0	1.60	6.49	0.89	0.00	0.00	0.00	0.73
24	ER6a	ExonRegion	0	1.04	9.69	0.56	0.00	0.00	1.42	2.28
25	E6a_E7a	KnownJunction	0	0.00	11.45	0.00	0.00	0.00	3.06	4.77
26	ER7a	ExonRegion	0	2.46	15.85	0.00	0.00	0.00	3.43	5.34
27	E7a_E8a	KnownJunction	0	7.28	15.63	0.00	0.00	0.00	1.66	5.16
28	ER8a	ExonRegion	0	8.99	22.15	1.25	0.88	0.00	0.61	5.11
29	E8a_E9a	KnownJunction	0	5.46	17.00	1.31	0.00	0.00	0.00	4.93
30	ER9a	ExonRegion	0	10.01	21.54	0.20	0.00	0.00	1.83	6.99
31	E9a_E10a	KnownJunction	0	18.68	10.46	0.00	0.00	0.00	0.00	5.03
32	ER10a	ExonRegion	0	17.70	26.25	0.36	0.03	0.00	0.78	6.50
33	E10a_E11a	KnownJunction	0	8.80	27.90	0.72	0.00	0.00	1.45	3.98
34	ER11a	ExonRegion	0	9.95	32.00	0.39	0.94	0.00	1.13	4.40
35	E11a_E12a	KnownJunction	0	10.06	28.64	0.00	0.00	0.00	1.66	2.12
36	E12_Aa	NovelBoundary	0	0.00	13.53	0.00	0.00	0.00	0.00	0.00
37	ER12a	ExonRegion	0	13.77	27.63	0.42	0.49	0.00	3.17	3.01
38	E12_Da	NovelBoundary	0	0.00	9.22	0.00	0.00	0.00	0.00	0.00
39	E12a_E13a	KnownJunction	0	14.32	20.36	0.89	1.52	0.00	2.68	4.57
40	I12	Intron	0	3.67	10.40	0.14	0.12	0.00	0.96	0.21
41	I12_SR1	SilentIntronRegion	0	3.67	10.40	0.14	0.12	0.00	0.96	0.21
42	ER13a	ExonRegion	0	19.23	27.48	0.56	2.49	0.00	2.72	4.36
43	E13a_E14a	KnownJunction	0	26.82	32.55	0.00	1.68	0.00	4.02	3.83
44	I13	Intron	0	1.90	9.90	0.00	0.31	0.00	0.50	0.11
45	I13_SR1	SilentIntronRegion	0	2.46	10.68	0.00	0.33	0.00	0.32	0.00
46	I13_SR2	SilentIntronRegion	0	1.00	8.67	0.00	0.27	0.00	0.78	0.29
47	E14_Aa	NovelBoundary	0	12.45	12.90	0.00	1.41	0.00	0.00	0.00
48	ER14a	ExonRegion	0	25.16	42.37	0.53	2.09	0.00	6.33	3.31
49	E14_Da	NovelBoundary	0	1.72	14.50	0.00	1.68	0.00	1.31	0.00
50	E14a_E15a	KnownJunction	0	23.58	43.64	0.00	2.30	0.00	9.06	3.25
51	E15_Aa	NovelBoundary	0	5.84	11.11	0.69	0.00	0.00	0.00	0.54
52	ER15a	ExonRegion	0	27.46	50.75	0.68	0.64	0.00	9.70	7.84
53	E15a_E16a	KnownJunction	0	27.67	44.53	0.83	0.00	0.00	4.61	9.72
54	I15_AR1	ActiveIntronRegion	0	10.82	5.71	0.81	0.00	0.00	1.76	0.00
55	E16_Aa	NovelBoundary	0	14.15	159.81	0.00	0.00	0.00	10.29	0.89
56	ER16a	ExonRegion	0	43.95	81.30	1.04	0.62	0.00	6.08	8.69
57	ER16b	ExonRegion	0	117.66	158.87	2.75	3.67	0.00	11.07	7.99
58	E16_Db	NovelBoundary	0	5.51	16.39	0.00	0.00	0.00	0.00	0.00
59	E16b_E17a	KnownJunction	0	76.01	46.11	1.35	0.00	0.00	3.16	2.12
60	E17_Ab	NovelBoundary	0	42.51	19.36	0.00	1.16	0.00	0.00	1.79
61	ER17a	ExonRegion	0	77.16	44.75	1.35	1.25	0.00	3.17	3.60
62	ER17b	ExonRegion	0	54.01	36.40	1.16	1.18	0.00	3.47	3.81
63	E17_Da	KnownBoundary	0	14.10	15.89	0.00	0.00	0.00	4.29	3.38
64	ER17c	ExonRegion	0	4.50	8.09	0.00	0.00	0.00	2.38	0.96