Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TET3	Gene	0	64.84	63.37	97.09	55.13	55.35	53.21	52.27
2	409262	Transcript	0	11.11	23.26	15.54	20.78	1.96	17.63	8.08
3	233310	Transcript	0	4.67	0.00	9.05	0.00	0.00	0.00	0.00
4	305799	Transcript	0	93.86	64.09	138.45	56.95	90.32	59.51	66.94
5	IG48_AR1	ActiveIntergenicRegion	0	0.95	2.42	4.87	1.14	25.94	1.75	2.32
6	IG48_AR3	ActiveIntergenicRegion	0	17.25	36.21	24.79	22.80	5.23	17.70	11.62
7	IG48_SR4	SilentIntergenicRegion	0	37.60	85.26	53.87	49.60	15.33	38.29	23.68
8	IG48_AR4	ActiveIntergenicRegion	0	24.41	73.64	49.29	37.22	13.27	39.70	23.20
9	IG48_AR5	ActiveIntergenicRegion	0	22.33	64.73	37.00	37.60	9.24	25.83	20.93
10	ER1a	ExonRegion	0	0.71	0.72	0.97	0.94	0.00	1.89	0.29
11	E1a_E2a	KnownJunction	0	0.00	1.63	1.32	1.46	0.00	1.39	0.87
12	ER2a	ExonRegion	0	9.81	19.61	11.60	18.53	1.75	16.33	7.69
13	E2a_E3a	KnownJunction	0	21.20	42.98	30.49	39.28	1.87	31.06	14.43
14	E2a_E4a	NovelJunction	1	4.49	10.25	6.06	8.99	2.12	0.00	3.18
15	I2_AR4	ActiveIntronRegion	0	18.63	4.01	11.62	4.20	3.81	1.23	4.70
16	ER3a	ExonRegion	0	23.84	51.37	33.31	43.67	6.18	37.47	17.11
17	E3_Ab	KnownBoundary	0	30.24	71.80	44.89	62.44	7.98	40.52	22.53
18	ER3b	ExonRegion	0	50.30	69.72	70.44	61.99	19.87	54.14	41.12
19	E3a_E4a	KnownJunction	0	21.48	37.91	34.24	48.06	8.78	36.15	27.47
20	ER4a	ExonRegion	0	19.75	42.44	43.32	45.70	17.31	31.09	29.33
21	E4a_E5a	KnownJunction	0	18.24	43.93	39.58	38.88	16.62	32.29	37.41
22	ER5a	ExonRegion	0	26.35	61.47	42.89	44.80	18.10	29.70	37.99
23	E5a_E6a	KnownJunction	0	25.85	71.83	47.16	55.65	21.07	39.23	29.45
24	I5_SR2	SilentIntronRegion	1	14.45	11.48	10.63	2.08	2.54	2.93	12.58
25	I5_AR3	ActiveIntronRegion	1	15.11	6.46	9.77	4.02	2.45	1.65	12.52
26	I5_AR4	ActiveIntronRegion	1	16.33	6.92	11.68	1.87	4.45	1.84	14.00
27	I5_AR5	ActiveIntronRegion	1	11.14	7.29	8.40	1.00	3.08	1.23	14.17
28	ER6a	ExonRegion	0	28.10	76.29	51.12	49.70	20.70	52.44	44.47
29	E6a_E7a	KnownJunction	0	31.08	84.20	56.56	51.42	26.00	55.21	48.91
30	ER7a	ExonRegion	0	33.04	82.85	63.59	52.62	29.17	51.39	42.86
31	E7a_E8a	KnownJunction	0	38.74	66.47	81.85	79.62	28.10	38.97	28.79
32	ER8a	ExonRegion	0	37.05	62.24	61.88	63.62	27.34	48.74	40.87
33	E8a_E9a	KnownJunction	0	24.55	61.21	42.22	49.06	23.54	41.33	45.79
34	ER9a	ExonRegion	0	41.27	70.87	70.02	70.67	32.31	55.08	57.39
35	E9a_E10a	KnownJunction	0	33.26	84.96	59.77	74.34	21.12	55.45	35.57
36	ER10a	ExonRegion	0	33.34	89.13	56.71	75.67	27.93	50.82	44.46
37	E10a_E11a	KnownJunction	0	38.29	80.18	61.85	86.96	22.52	52.88	49.72
38	E11_Aa	NovelBoundary	1	13.39	5.62	32.28	0.00	0.00	0.00	2.79
39	ER11a	ExonRegion	0	24.72	67.10	46.49	56.15	23.87	51.12	44.17
40	E11_Da	KnownBoundary	0	22.08	57.64	32.32	33.29	11.48	27.95	23.65
41	E11a_E11b	KnownJunction	0	4.67	0.00	9.05	0.00	0.00	0.00	0.00
42	ER11b	ExonRegion	0	17.25	45.98	28.59	33.43	12.72	33.74	18.72
43	E11_Ab	KnownBoundary	0	14.60	48.18	34.56	39.91	10.93	30.26	23.62
44	ER11c	ExonRegion	0	19.48	40.16	30.39	39.11	14.47	33.35	23.11
45	E11_Db	KnownBoundary	0	62.22	27.95	74.29	24.57	21.83	27.50	30.43
46	ER11d	ExonRegion	0	41.72	31.28	63.82	24.52	16.04	30.65	25.04
47	E11_Dc	KnownBoundary	0	53.72	45.76	130.89	47.30	22.57	47.78	36.16
48	ER11e	ExonRegion	0	93.86	64.09	138.45	56.95	90.32	59.51	66.94
49	IG49_SR2	SilentIntergenicRegion	0	26.20	11.42	15.32	1.80	10.71	0.76	18.33
50	IG49_AR2	ActiveIntergenicRegion	0	17.48	9.34	15.03	2.49	9.16	0.00	13.96
51	IG49_AR3	ActiveIntergenicRegion	0	17.90	6.70	7.31	2.71	7.58	1.50	9.76
52	IG49_SR3	SilentIntergenicRegion	0	11.64	4.12	3.74	1.93	4.86	1.48	4.45