Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CTNNA2	Gene	0	0.07	0.00	0.01	0.02	38.35	0.28	0.00
2	409536	Transcript	0	0.12	0.00	0.06	0.08	0.54	0.32	0.00
3	409971	Transcript	0	0.00	0.00	0.00	0.00	7.35	0.00	0.00
4	409266	Transcript	0	0.00	0.00	0.00	0.00	0.06	0.47	0.00
5	402739	Transcript	0	0.00	0.00	0.00	0.00	7.42	0.00	0.00
6	361291	Transcript	0	0	0	0	0	0	0	0
7	343114	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	409550	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	E2_Aa	NovelBoundary	0	13.92	19.73	10.61	9.75	7.79	3.83	10.45
12	ER2a	ExonRegion	0	1.16	0.00	0.56	0.77	5.37	0.00	0.00
13	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.51	0.00
17	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.23	0.00
19	E5a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.45	0.00
20	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	6.48	0.00	0.00
21	E6a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	13.14	0.00	0.00
22	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	13.50	1.23	0.00
25	ER8b	ExonRegion	0	0.00	0.00	0.00	0.00	27.15	1.20	0.00
26	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.66	0.00
27	E8a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	54.57	1.66	0.00
28	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.25	0.24	0.00
29	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	36.50	1.06	0.00
30	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	44.84	1.39	0.00
31	ER11a	ExonRegion	0	0.00	0.00	0.00	0.00	49.97	0.15	0.00
32	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	67.06	0.00	0.00
33	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	52.50	0.00	0.00
34	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	47.28	0.00	0.00
35	ER13a	ExonRegion	0	0.00	0.00	0.00	0.00	40.76	0.00	0.00
36	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	32.11	0.00	0.00
37	ER14a	ExonRegion	0	0.00	0.00	0.00	0.00	19.98	0.00	0.00
38	E14a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	31.70	0.00	0.00
39	I14_AR5	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	8.26	0.00	0.00
40	ER15a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	E15a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER16a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	ER17a	ExonRegion	0	0.00	0.00	0.00	0.00	44.27	0.00	0.00
45	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	55.58	0.00	0.00
46	ER18a	ExonRegion	0	0.00	0.00	0.00	0.00	58.92	0.00	0.00
47	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	54.24	0.00	0.00
48	ER19a	ExonRegion	0	0.00	0.00	0.00	0.00	51.24	0.00	0.00
49	E19a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	75.06	0.00	0.00
50	ER20a	ExonRegion	0	0.00	0.00	0.00	0.00	51.68	0.00	0.00
51	E20a_E21a	KnownJunction	0	0.00	0.00	0.00	0.00	41.50	0.00	0.00
52	ER21a	ExonRegion	0	0.15	0.00	0.00	0.00	49.85	0.99	0.00
53	E21_Da	KnownBoundary	0	0.63	0.00	0.00	0.00	55.17	1.61	0.00
54	ER21b	ExonRegion	0	0.75	0.00	0.00	0.00	66.73	0.91	0.00
55	E21b_E22a	KnownJunction	0	0.80	0.00	0.00	0.00	91.52	0.00	0.00
56	ER22a	ExonRegion	0	0.63	0.00	0.00	0.00	70.78	0.50	0.00
57	E22a_E23a	KnownJunction	0	0.68	0.00	0.00	0.00	69.44	1.21	0.00
58	ER23a	ExonRegion	0	0.07	0.00	0.00	0.00	84.69	0.97	0.00
59	E23a_E24a	KnownJunction	0	0.00	0.00	0.00	0.00	68.56	0.00	0.00
60	ER24a	ExonRegion	0	0.00	0.00	0.00	0.00	84.80	0.00	0.00
61	E24a_E25a	KnownJunction	0	0.00	0.00	0.00	0.00	95.21	0.00	0.00
62	ER25a	ExonRegion	0	0.00	0.00	0.00	0.00	91.00	0.00	0.00
63	E25a_E26a	KnownJunction	0	0.00	0.00	0.00	0.00	110.38	0.00	0.00
64	ER26a	ExonRegion	0	0.00	0.00	0.00	0.00	124.84	0.00	0.00
65	E26a_E27a	KnownJunction	0	0.00	0.00	0.00	0.00	8.85	0.00	0.00
66	E26a_E28a	KnownJunction	0	0.00	0.00	0.00	0.00	72.18	0.00	0.00
67	ER27a	ExonRegion	0	0.00	0.00	0.00	0.00	7.01	0.00	0.00
68	E27a_E28a	KnownJunction	0	0.00	0.00	0.00	0.00	6.39	0.00	0.00
69	ER28a	ExonRegion	0	0.00	0.00	0.00	0.00	56.53	0.42	0.00
70	E28_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	3.85	0.00	0.00
71	ER28b	ExonRegion	0	0.00	0.00	0.00	0.00	6.38	0.07	0.00
72	ER28c	ExonRegion	0	0.00	0.00	0.00	0.00	2.43	0.00	0.00