Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MTA3	Gene	0	22.29	16.61	20.13	19.53	262.71	18.03	32.83
2	405592	Transcript	1	0.81	4.69	9.54	5.07	22.12	8.44	0.58
3	406652	Transcript	0	0.00	1.27	0.42	0.52	11.98	1.37	0.00
4	407270	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	282366	Transcript	0	0	0	0	0	0	0	0
6	406911	Transcript	0	0	0	0	0	0	0	0
7	409019	Transcript	0	0.00	0.00	0.00	0.01	0.38	0.03	0.01
8	405094	Transcript	0	0	0	0	0	0	0	0
9	IG2	Intergenic	0	0.93	2.51	2.75	4.07	9.37	4.63	0.23
10	IG2_AR1	ActiveIntergenicRegion	0	1.02	3.01	3.42	5.06	11.58	5.24	0.29
11	ER1a	ExonRegion	0	0.81	3.11	6.51	5.09	20.50	7.43	0.12
12	E1a_E2a	KnownJunction	0	0.62	6.88	7.10	7.31	12.17	1.15	0.00
13	ER2a	ExonRegion	1	1.13	4.20	11.80	6.34	21.65	8.98	0.51
14	E2a_E5a	KnownJunction	1	0.70	4.57	12.76	1.52	34.16	16.19	1.71
15	ER3a	ExonRegion	0	0.00	2.54	0.84	1.04	4.58	1.19	0.00
16	E3a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	19.39	1.55	0.00
17	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER4b	ExonRegion	0	0.00	0.03	0.00	0.00	0.33	0.00	0.00
19	E4_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER4c	ExonRegion	0	0.26	3.37	0.28	0.28	18.61	0.29	0.78
21	E4_Ad	KnownBoundary	0	1.84	6.88	2.00	1.08	15.65	4.18	4.17
22	ER4d	ExonRegion	0	3.94	10.33	4.06	2.49	46.67	2.45	10.12
23	E4a_E5a	KnownJunction	0	41.88	20.33	31.69	10.27	696.26	12.78	48.67
24	ER4e	ExonRegion	0	21.60	16.20	18.31	7.20	373.85	8.95	28.91
25	ER5a	ExonRegion	0	39.13	28.51	43.74	25.42	592.33	44.37	54.10
26	E5a_E6a	KnownJunction	0	36.80	31.92	39.98	38.52	376.04	61.24	47.51
27	ER6a	ExonRegion	0	53.55	56.76	56.48	54.00	532.70	61.30	78.07
28	E6a_E7a	KnownJunction	0	80.71	68.65	69.67	58.00	649.86	49.50	101.94
29	ER7a	ExonRegion	0	67.28	82.51	67.54	65.52	1099.24	57.39	118.13
30	E7a_E8a	KnownJunction	0	63.00	80.15	50.58	55.43	1098.95	51.83	113.91
31	ER8a	ExonRegion	0	58.21	84.43	73.88	72.19	1056.01	46.43	133.85
32	E8a_E9a	KnownJunction	0	53.79	71.83	63.78	70.49	1043.88	44.70	138.83
33	ER9a	ExonRegion	0	64.31	71.72	59.71	60.63	1114.60	57.33	120.07
34	E9a_E10a	KnownJunction	0	85.34	66.70	68.79	73.55	1275.26	58.37	159.28
35	ER10a	ExonRegion	0	90.00	70.03	81.10	73.50	1560.04	56.07	164.78
36	E10a_E11a	KnownJunction	0	95.82	67.91	71.72	82.63	1307.88	55.07	145.52
37	ER11a	ExonRegion	0	70.87	66.05	54.82	68.87	1232.13	51.95	134.32
38	E11a_E12a	KnownJunction	0	55.34	62.87	61.98	69.06	1260.44	57.94	138.21
39	ER12a	ExonRegion	0	85.30	69.72	69.68	65.54	1377.75	51.22	146.05
40	E12a_E13a	KnownJunction	0	84.80	53.20	63.47	56.54	1297.18	36.77	119.95
41	ER13a	ExonRegion	0	95.72	69.98	62.12	53.49	1225.28	48.65	119.32
42	E13a_E14a	KnownJunction	0	99.77	84.33	66.45	46.41	1294.67	58.85	129.54
43	ER14a	ExonRegion	0	120.63	87.53	85.69	55.01	1585.70	60.07	174.02
44	E14a_E15a	KnownJunction	0	60.92	26.51	43.24	41.45	702.95	27.26	89.89
45	E14a_E15b	KnownJunction	0	50.32	39.96	43.15	23.24	868.84	18.63	70.94
46	I14_AR3	ActiveIntronRegion	0	5.54	1.27	5.72	0.68	57.29	1.96	4.02
47	I14_AR5	ActiveIntronRegion	0	4.81	1.09	5.76	0.18	56.67	0.37	3.09
48	ER15a	ExonRegion	0	83.76	42.82	56.90	40.21	896.91	35.25	110.97
49	ER15b	ExonRegion	0	103.66	56.56	72.53	54.14	1248.46	56.48	134.90
50	E15a_E16a	KnownJunction	0	75.27	58.56	62.97	65.07	1413.35	55.40	121.69
51	ER16a	ExonRegion	0	93.05	58.38	77.67	64.71	1110.48	67.64	111.14
52	E16a_E17a	KnownJunction	0	72.42	47.05	51.95	40.93	675.59	57.11	89.36
53	ER17a	ExonRegion	0	84.20	47.80	52.40	56.77	619.82	54.26	81.41
54	E17_Da	KnownBoundary	0	34.00	25.56	19.46	34.65	340.17	28.94	38.25
55	E17a_E18a	KnownJunction	0	35.12	3.49	21.51	11.00	30.84	11.50	23.52
56	ER17b	ExonRegion	0	7.25	5.42	3.93	7.35	121.23	3.45	12.25
57	I17_SR1	SilentIntronRegion	0	3.42	1.88	1.37	1.18	87.66	1.02	3.26
58	ER18a	ExonRegion	1	23.65	4.61	26.88	12.03	47.54	18.57	23.55
59	E18a_E19a	KnownJunction	1	33.53	5.02	41.16	11.27	70.70	23.45	29.94
60	ER19a	ExonRegion	1	26.03	5.10	23.62	14.36	68.80	16.38	20.14
61	E19b_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
62	E19b_E21a	KnownJunction	0	6.29	3.26	13.98	13.74	27.09	5.84	18.72
63	ER19b	ExonRegion	0	7.68	3.64	14.23	12.47	29.15	3.68	18.21
64	ER20a	ExonRegion	0	0.01	0.00	0.01	0.02	1.13	0.08	0.02
65	E20a_E21a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
66	ER21a	ExonRegion	0	7.18	3.92	16.54	11.41	30.34	11.46	17.72
67	ER21b	ExonRegion	0	12.58	5.12	14.93	11.48	33.66	9.31	14.09
68	E21_Db	KnownBoundary	0	13.35	2.76	13.49	10.86	27.87	9.00	11.04
69	ER21c	ExonRegion	0	4.37	2.53	5.70	8.64	17.23	7.95	8.33