Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RP1-199H16.5	Gene	0	8.05	4.28	2.71	2.09	10.28	0.94	2.03
2	406767	Transcript	0	4.32	2.29	2.11	0.57	6.22	0.33	1.09
3	355830	Transcript	0	2.79	0.95	1.68	0.38	3.56	0.03	1.06
4	ER1a	ExonRegion	0	3.19	2.68	1.04	1.33	0.59	0.29	0.91
5	E1_Ab	KnownBoundary	0	1.80	1.37	1.52	1.38	3.27	3.67	2.29
6	ER1b	ExonRegion	0	2.75	3.98	1.07	2.73	1.02	1.83	1.02
7	E1a_E2a	KnownJunction	0	7.89	5.88	1.28	1.33	2.05	0.00	1.43
8	ER2a	ExonRegion	0	4.80	7.72	1.62	3.37	9.90	1.63	2.64
9	E2a_E3a	KnownJunction	0	4.27	10.19	2.70	3.17	6.45	0.00	2.78
10	ER3a	ExonRegion	0	8.34	8.11	4.05	2.58	10.69	0.21	2.89
11	E3a_E4a	KnownJunction	0	8.85	12.45	2.85	2.36	6.64	1.21	1.50
12	ER4a	ExonRegion	0	10.03	4.20	1.63	1.71	9.04	1.10	2.35
13	E4_Da	NovelBoundary	0	6.33	5.02	1.78	1.68	9.80	0.00	1.59
14	E4a_E5a	KnownJunction	0	9.26	0.00	1.51	1.35	5.83	0.00	2.62
15	ER5a	ExonRegion	0	10.31	2.40	4.63	1.88	13.19	1.19	0.91
16	E5a_E6a	KnownJunction	0	11.73	6.62	6.80	1.30	13.07	1.23	0.00
17	ER6a	ExonRegion	0	15.13	7.70	4.76	0.78	17.82	1.50	2.47
18	E6a_E7a	KnownJunction	0	8.61	4.97	3.55	2.47	15.51	4.42	0.54
19	I6_AR2	ActiveIntronRegion	0	3.64	2.57	1.35	0.29	8.25	0.00	1.87
20	ER7a	ExonRegion	0	6.04	3.22	3.23	1.87	11.35	2.67	1.57
21	E7a_E8a	KnownJunction	0	1.02	1.10	0.70	0.00	8.78	3.94	2.67
22	ER8a	ExonRegion	0	2.14	2.18	0.59	0.00	9.26	0.63	1.85
23	E8a_E9a	KnownJunction	0	4.31	5.12	0.00	0.00	3.11	0.00	2.38
24	ER9a	ExonRegion	0	9.15	4.32	1.55	2.12	9.16	0.00	2.49
25	E9a_E10b	KnownJunction	0	9.93	3.26	5.82	1.30	10.95	0.00	3.98
26	E9b_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER9b	ExonRegion	0	0.00	0.00	0.00	0.00	0.81	0.00	0.00
28	ER10a	ExonRegion	0	4.23	1.21	3.05	0.62	6.07	0.00	1.69
29	ER10b	ExonRegion	0	9.97	4.41	2.29	1.08	11.60	0.00	4.50
30	E10a_E11a	KnownJunction	0	7.58	4.76	0.00	0.00	14.57	0.00	2.02
31	ER11a	ExonRegion	0	12.17	3.04	3.27	4.64	13.25	0.00	4.90
32	E11a_E12a	KnownJunction	0	12.80	4.12	5.53	5.23	6.13	0.00	5.62
33	ER12a	ExonRegion	0	14.03	4.98	2.96	3.00	16.10	0.93	2.85
34	E12a_E13a	KnownJunction	0	16.09	5.62	2.44	3.25	24.53	3.27	3.58
35	ER13a	ExonRegion	0	18.76	5.35	4.71	1.81	25.19	1.61	3.29
36	E13a_E14a	KnownJunction	0	20.09	9.93	6.90	1.68	19.06	1.66	3.71
37	ER14a	ExonRegion	0	17.02	5.11	5.60	3.18	21.41	2.33	3.39
38	E14a_E15b	KnownJunction	0	12.60	5.39	5.02	0.00	23.26	1.66	2.84
39	E14b_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	ER14b	ExonRegion	0	0.10	0.00	0.34	0.00	1.32	0.00	0.00
41	E15_Aa	NovelBoundary	0	1.75	7.80	0.00	1.33	3.41	0.00	0.89
42	ER15a	ExonRegion	0	1.12	0.55	0.55	0.23	1.99	0.11	0.25
43	ER15b	ExonRegion	0	10.21	5.81	4.38	4.60	14.13	2.98	2.81
44	E15a_E16a	KnownJunction	0	15.09	2.81	2.76	4.44	13.37	1.61	3.87
45	ER16a	ExonRegion	0	6.49	2.10	2.55	1.43	14.00	0.33	1.05
46	E16a_E17a	KnownJunction	0	5.32	1.52	0.00	0.00	0.00	0.00	0.56
47	ER17a	ExonRegion	0	8.19	2.32	2.64	2.10	10.37	0.00	0.70
48	E17_Da	NovelBoundary	0	13.44	2.39	1.42	4.36	23.12	0.00	4.37
49	E17a_E18a	KnownJunction	0	1.92	0.00	0.00	0.00	0.00	0.00	0.72
50	I17	Intron	0	7.84	2.10	1.80	0.58	10.10	0.08	2.16
51	I17_AR1	ActiveIntronRegion	0	15.46	1.81	2.89	0.81	15.87	0.00	1.07
52	I17_SR1	SilentIntronRegion	0	11.74	1.92	2.72	0.24	13.42	0.17	2.35
53	E18_Aa	NovelBoundary	0	2.92	1.31	0.00	1.16	16.51	0.00	1.42
54	ER18a	ExonRegion	0	2.96	0.04	0.45	0.02	3.83	0.00	0.33
55	E18a_E19a	KnownJunction	0	3.81	0.00	0.89	0.00	1.04	0.00	0.83
56	I18	Intron	0	6.10	1.63	3.37	0.84	7.81	0.00	1.13
57	I18_AR1	ActiveIntronRegion	0	6.11	1.63	3.38	0.84	7.83	0.00	1.13
58	E19_Aa	NovelBoundary	0	6.38	1.21	1.37	1.06	7.56	0.00	2.72
59	ER19a	ExonRegion	0	6.13	3.87	4.03	2.19	4.57	0.00	1.91
60	E19_Da	KnownBoundary	0	8.04	7.17	6.41	3.12	9.66	0.00	2.92
61	ER19b	ExonRegion	0	5.87	4.48	3.54	1.45	6.61	0.00	1.11