Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 TNRC6B Gene 0 34.60 29.28 29.57 36.78 60.96 45.07 25.57 2 400140 Transcript 0 12.02 22.47 7.09 34.57 3.23 29.52 4.54 3 402203 Transcript 0 0.92 0.01 0.86 0.01 0.35 0.02 0.00 4 301923 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 335727 Transcript 0 35.94 6.23 29.66 13.71 62.96 6.27 17.55 6 IG2 Intergenic 0 14.78 10.83 25.58 21.47 17.20 0.64 71.18 7 IG2_SR1 SilentIntergenicRegion 0 15.28 14.12 24.82 30.54 18.81 0.70 80.71 8 IG2_AR1 ActiveIntergenicRegion 0 26.91 4.27 25.34 33.47 45.39 0.00 102.61 9 IG2_AR2 ActiveIntergenicRegion 0 24.40 20.31 38.98 46.06 42.99 1.66 169.50 10 IG2_SR2 SilentIntergenicRegion 0 12.78 9.53 24.76 14.40 15.27 0.66 52.62 11 IG2_AR3 ActiveIntergenicRegion 0 8.66 7.19 18.39 9.63 10.11 0.00 36.06 12 IG2_SR3 SilentIntergenicRegion 0 15.13 5.35 27.95 7.17 7.66 0.29 36.77 13 IG2_AR4 ActiveIntergenicRegion 0 16.72 12.78 42.56 13.20 8.63 1.10 65.96 14 IG2_AR5 ActiveIntergenicRegion 0 12.61 11.69 29.61 9.63 6.57 0.12 49.63 15 IG2_AR6 ActiveIntergenicRegion 0 22.23 10.04 33.73 16.38 11.28 1.23 69.35 16 IG2_SR4 SilentIntergenicRegion 0 14.11 15.60 30.16 9.78 7.84 0.58 60.80 17 IG2_AR7 ActiveIntergenicRegion 0 11.71 7.35 23.25 11.01 5.73 0.18 36.29 18 IG2_SR5 SilentIntergenicRegion 0 12.04 4.92 23.59 8.84 7.49 0.22 47.88 19 IG2_AR8 ActiveIntergenicRegion 0 8.85 2.84 13.71 8.03 4.62 0.24 14.29 20 ER1a ExonRegion 0 10.14 16.41 4.74 25.91 3.26 20.21 2.35 21 E1a_E3a KnownJunction 0 13.90 28.53 9.44 43.24 3.20 38.83 6.72 22 ER2a ExonRegion 0 1.84 0.02 1.00 0.02 0.70 0.03 0.01 23 E2a_E3a KnownJunction 0 0.00 0.00 0.72 0.00 0.00 0.00 0.00 24 I2_AR1 ActiveIntronRegion 0 10.49 8.85 8.49 9.25 5.38 5.01 2.34 25 ER3a ExonRegion 1 33.13 49.55 35.03 56.55 10.35 58.48 10.25 26 E3a_E4a KnownJunction 1 52.72 56.90 53.40 57.60 16.69 66.79 12.86 27 ER4a ExonRegion 1 51.77 57.33 40.54 46.74 18.61 71.27 12.20 28 E4a_E6a KnownJunction 1 58.20 65.47 35.80 53.78 13.74 74.80 12.31 29 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E6_Aa NovelBoundary 1 8.04 6.46 10.69 10.10 1.18 12.86 0.00 32 ER6a ExonRegion 1 42.90 66.46 40.53 57.49 13.29 69.56 13.45 33 E6a_E8a KnownJunction 0 32.40 72.30 27.36 60.36 16.94 56.65 14.56 34 ER7a ExonRegion 0 28.58 5.61 27.66 14.33 42.76 6.19 12.38 35 E7a_E8a KnownJunction 0 43.29 6.86 31.66 13.09 83.15 6.35 22.72 36 ER8a ExonRegion 0 55.22 63.63 34.98 67.41 60.23 70.34 24.06 37 E8a_E9a KnownJunction 0 35.88 24.35 16.34 46.87 30.91 38.99 16.95 38 E8a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 E9a_E12a KnownJunction 1 54.41 60.42 45.42 36.52 31.01 64.72 15.81 40 ER9a ExonRegion 1 69.02 61.46 42.71 59.57 39.09 72.17 23.21 41 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER10a ExonRegion 0 0.00 0.00 0.00 0.08 0.00 0.00 0.00 43 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER11a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 ER12a ExonRegion 0 29.57 47.22 21.59 48.90 34.38 53.38 20.03 46 E12a_E13a KnownJunction 0 46.77 40.30 35.97 47.08 40.27 55.10 26.71 47 E12a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 E13_Aa NovelBoundary 1 19.54 1.13 11.24 4.14 0.88 0.00 0.73 49 ER13a ExonRegion 0 46.05 50.84 36.34 56.54 50.96 60.22 22.87 50 E13a_E14a NovelJunction 1 24.80 23.07 9.54 29.12 13.09 27.34 8.51 51 E13a_E15a KnownJunction 1 26.59 23.99 20.92 33.84 33.75 25.33 5.52 52 ER14a ExonRegion 0 13.50 17.27 7.35 22.50 15.99 21.46 7.89 53 E14a_E15a KnownJunction 0 10.51 16.39 7.95 18.12 10.56 27.58 11.57 54 ER15a ExonRegion 0 29.92 49.11 26.19 57.70 43.75 57.34 18.75 55 E15a_E16a KnownJunction 0 35.08 58.59 41.65 57.54 48.39 65.95 26.33 56 ER16a ExonRegion 0 37.32 62.22 40.78 67.85 63.56 72.43 25.23 57 E16a_E17a KnownJunction 0 34.33 56.54 42.15 63.26 70.31 64.69 22.80 58 ER17a ExonRegion 0 42.06 66.71 48.71 63.87 83.34 67.78 26.41 59 E17a_E18a KnownJunction 0 37.15 61.26 32.19 61.25 91.38 61.61 24.82 60 ER18a ExonRegion 0 59.16 62.71 53.02 62.23 70.07 69.50 34.62 61 E18a_E19a KnownJunction 0 35.22 44.00 46.49 44.46 73.05 59.50 29.51 62 ER19a ExonRegion 0 66.29 52.97 61.39 60.05 67.31 71.18 33.68 63 E19a_E20a KnownJunction 0 53.39 40.96 46.00 47.00 68.37 57.06 25.41 64 ER20a ExonRegion 0 53.05 64.62 44.96 57.55 60.81 73.27 28.33 65 E20a_E21a KnownJunction 0 44.78 66.20 34.91 75.72 52.21 56.36 31.37 66 ER21a ExonRegion 0 40.03 73.97 33.64 77.27 56.23 76.28 28.00 67 E21a_E22a KnownJunction 0 26.42 64.00 26.41 54.59 64.89 100.31 25.17 68 ER22a ExonRegion 0 29.01 71.33 26.21 101.73 52.36 68.24 24.51 69 E22_Da NovelBoundary 1 1.82 1.63 0.86 139.55 0.00 1.58 0.00 70 E22a_E23a KnownJunction 0 40.31 60.08 37.05 68.08 88.91 90.90 27.72 71 ER23a ExonRegion 0 40.44 74.68 40.98 67.17 69.01 75.44 29.55 72 E23a_E24a KnownJunction 1 33.63 77.53 43.36 60.74 59.02 70.89 18.95 73 E23a_E25a NovelJunction 0 6.08 10.56 5.83 14.25 0.00 4.85 0.54 74 ER24a ExonRegion 0 44.89 68.84 47.81 67.60 74.86 94.34 33.54 75 E24a_E25a KnownJunction 0 45.36 68.73 47.65 84.50 58.53 126.58 37.45 76 ER25a ExonRegion 0 70.55 84.16 64.78 90.71 124.95 126.52 57.75 77 E25a_E26a KnownJunction 0 138.09 91.61 93.26 91.73 221.81 142.98 60.29 78 ER26a ExonRegion 0 111.48 104.83 91.10 103.41 117.88 161.53 61.99 79 E26a_E27a KnownJunction 0 83.45 108.74 64.41 103.30 82.87 170.63 71.61 80 ER27a ExonRegion 0 90.22 84.25 67.11 97.53 135.26 139.93 53.76 81 E27_Da NovelBoundary 1 5.64 1.63 3.02 11.43 2.17 10.45 0.00 82 E27a_E28a KnownJunction 0 53.76 42.24 36.97 59.98 45.02 92.00 36.93 83 ER28a ExonRegion 0 58.56 55.20 44.77 79.24 109.99 114.62 40.41 84 E28a_E29a KnownJunction 0 68.41 54.25 42.74 93.92 85.27 125.58 45.52 85 ER29a ExonRegion 0 53.59 58.50 36.86 89.10 79.37 108.72 41.11 86 E29a_E30a KnownJunction 0 47.00 50.68 35.58 71.71 71.07 107.79 31.06 87 ER30a ExonRegion 0 28.10 32.12 20.19 37.67 38.04 59.72 17.12 88 E30_Da KnownBoundary 0 10.05 29.45 5.30 35.25 9.75 76.62 3.10 89 ER30b ExonRegion 0 30.34 18.55 26.80 26.88 64.85 35.10 26.28 90 ER30c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00