Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	UNC84B	Gene	0	160.26	327.96	149.97	226.79	21.17	147.11	115.58
2	406622	Transcript	0	0.00	0.01	0.01	0.01	0.00	0.01	0.01
3	405018	Transcript	0	2.56	5.69	1.26	3.50	0.48	2.22	1.12
4	216064	Transcript	0	0	0	0	0	0	0	0
5	405510	Transcript	0	4.80	8.66	7.25	4.82	0.69	3.82	3.15
6	396784	Transcript	0	0	0	0	0	0	0	0
7	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER2a	ExonRegion	0	0.01	0.04	0.02	0.02	0.00	0.02	0.02
10	E2a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER3a	ExonRegion	0	0.00	4.99	0.00	1.98	0.00	1.48	0.00
12	E3_Ab	KnownBoundary	0	0.00	18.34	0.00	4.82	0.00	4.29	0.59
13	ER3b	ExonRegion	0	6.27	46.62	4.98	34.85	0.18	19.70	2.91
14	E3a_E5a	NovelJunction	0	17.57	23.33	11.40	13.30	3.27	10.91	8.56
15	E3a_E6a	KnownJunction	0	32.58	114.75	31.83	88.67	1.18	57.91	22.24
16	ER4a	ExonRegion	0	5.94	4.06	3.07	5.01	0.00	4.71	0.57
17	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	1.68	0.00	0.00	0.73
18	ER5a	ExonRegion	0	6.49	26.95	15.38	9.84	0.81	7.40	8.74
19	ER5b	ExonRegion	0	19.07	53.10	30.71	24.35	1.15	19.36	18.60
20	E5a_E6a	KnownJunction	0	28.44	65.31	35.84	33.38	2.10	34.49	24.81
21	ER6a	ExonRegion	0	70.11	315.60	90.70	191.87	7.49	144.98	80.82
22	E6a_E7a	KnownJunction	0	119.15	427.94	132.95	240.76	10.24	168.89	99.03
23	ER7a	ExonRegion	0	135.40	436.57	162.77	249.61	13.36	170.11	130.92
24	E7_Da	NovelBoundary	1	56.63	28.27	44.56	13.00	1.18	8.71	0.00
25	E7a_E8a	KnownJunction	0	109.20	393.07	130.25	200.88	13.62	118.64	90.47
26	E7a_E9b	NovelJunction	0	6.08	20.36	10.94	29.66	0.00	18.97	5.57
27	ER8a	ExonRegion	0	123.80	331.29	128.11	183.84	13.94	114.40	104.95
28	E8a_E9a	KnownJunction	0	1.64	0.00	0.00	0.00	0.00	0.00	0.82
29	E8a_E9b	KnownJunction	0	123.94	310.24	142.70	182.19	17.80	139.76	135.78
30	ER9a	ExonRegion	0	6.05	12.07	3.77	8.51	1.44	5.17	2.55
31	E9_Ab	KnownBoundary	0	9.20	15.03	3.99	13.22	0.92	5.87	0.79
32	ER9b	ExonRegion	0	138.83	320.66	146.76	197.20	13.92	131.22	111.83
33	E9a_E10a	KnownJunction	0	138.53	329.02	132.29	206.92	10.03	124.65	119.29
34	E10_Aa	NovelBoundary	1	53.49	9.01	42.44	11.78	0.00	4.66	0.00
35	ER10a	ExonRegion	0	147.29	423.12	161.60	219.68	15.66	165.50	139.82
36	E10a_E11a	KnownJunction	0	175.78	475.62	204.99	210.71	12.63	172.78	171.42
37	I10_AR1	ActiveIntronRegion	1	9.71	14.61	9.15	27.63	0.64	34.51	0.52
38	E11_Aa	NovelBoundary	1	71.20	22.96	62.54	20.72	0.00	52.82	0.86
39	ER11a	ExonRegion	0	197.81	520.87	211.43	253.78	18.83	175.56	172.54
40	E11a_E12a	KnownJunction	0	227.48	506.36	224.55	279.63	12.77	180.52	159.29
41	ER12a	ExonRegion	0	266.91	537.53	263.38	303.54	23.34	180.05	176.71
42	E12a_E13a	KnownJunction	0	381.37	539.83	328.89	323.90	38.80	181.19	197.14
43	I12	Intron	1	33.10	26.29	19.48	33.51	8.74	28.96	4.01
44	I12_SR1	SilentIntronRegion	1	32.53	23.71	23.17	25.15	2.18	26.99	2.31
45	I12_AR2	ActiveIntronRegion	0	43.38	38.82	25.69	54.00	15.91	43.28	6.68
46	E13_Aa	NovelBoundary	1	192.90	50.15	137.44	100.94	19.06	54.24	13.47
47	ER13a	ExonRegion	1	484.46	486.00	341.48	378.45	54.69	189.10	164.85
48	E13_Da	NovelBoundary	1	123.09	65.78	70.49	109.94	32.76	66.49	16.58
49	E13a_E14a	KnownJunction	0	487.40	469.84	359.24	405.96	35.46	214.85	213.35
50	I13	Intron	0	32.36	20.36	26.40	42.14	22.62	18.83	4.62
51	I13_AR1	ActiveIntronRegion	1	56.73	35.71	45.45	73.86	37.09	32.98	8.10
52	E14_Aa	NovelBoundary	0	35.63	69.09	49.05	92.60	28.06	49.23	21.30
53	ER14a	ExonRegion	0	391.65	497.36	310.02	373.21	39.73	189.18	197.69
54	E14_Da	NovelBoundary	1	30.93	47.34	42.25	59.22	26.53	33.53	9.22
55	E14a_E15a	KnownJunction	0	308.50	407.81	229.57	252.65	18.49	136.28	146.07
56	I14	Intron	0	37.46	48.50	49.37	61.92	26.91	43.88	12.81
57	I14_SR1	SilentIntronRegion	0	37.62	48.72	49.57	62.19	27.02	44.06	12.86
58	E15_Aa	NovelBoundary	1	29.01	67.04	60.14	51.64	16.25	31.89	16.87
59	ER15a	ExonRegion	0	336.92	407.17	277.30	277.34	26.45	163.70	165.06
60	E15_Da	NovelBoundary	0	42.66	50.84	43.53	80.49	36.26	51.05	13.24
61	E15a_E16a	KnownJunction	0	275.80	340.79	251.87	220.74	26.74	131.16	140.06
62	I15	Intron	0	54.36	64.71	53.30	71.06	14.88	56.06	16.36
63	I15_AR1	ActiveIntronRegion	0	54.54	64.93	53.48	71.29	14.94	56.25	16.42
64	E16_Aa	NovelBoundary	0	40.74	60.32	45.90	70.08	14.59	50.44	16.71
65	ER16a	ExonRegion	0	190.20	409.13	190.42	280.23	29.89	161.48	138.95
66	E16_Da	NovelBoundary	1	27.99	70.35	44.79	81.38	11.99	63.25	12.30
67	E16a_E17a	KnownJunction	0	218.64	391.10	190.90	250.21	16.60	177.49	163.38
68	I16	Intron	0	24.63	65.29	35.50	67.88	16.94	40.93	12.50
69	I16_AR1	ActiveIntronRegion	0	24.77	65.66	35.71	68.27	17.03	41.18	12.57
70	E17_Aa	NovelBoundary	1	41.11	44.53	43.37	75.18	20.15	43.34	9.19
71	ER17a	ExonRegion	0	215.38	466.13	198.45	345.08	35.94	206.70	201.89
72	E17_Da	NovelBoundary	0	29.06	41.77	28.65	69.33	15.84	26.80	7.93
73	E17a_E18a	KnownJunction	0	228.55	571.11	215.07	359.91	34.21	224.45	269.62
74	I17	Intron	0	26.91	45.87	22.64	50.21	15.74	25.19	9.16
75	I17_AR1	ActiveIntronRegion	0	27.09	46.16	22.79	50.52	15.85	25.35	9.22
76	E18_Aa	NovelBoundary	0	34.48	61.26	27.62	57.24	18.90	39.34	10.25
77	ER18a	ExonRegion	0	227.71	585.62	231.74	385.47	39.23	235.45	282.79
78	E18_Da	NovelBoundary	0	32.68	50.60	34.80	70.90	25.10	40.55	18.92
79	E18a_E19a	KnownJunction	0	240.40	569.59	243.32	416.34	21.67	212.50	286.30
80	I18	Intron	0	28.92	51.93	31.92	49.01	16.42	24.76	13.61
81	I18_AR1	ActiveIntronRegion	0	29.07	52.21	32.09	49.25	16.51	24.89	13.69
82	E19_Aa	NovelBoundary	0	12.85	44.85	14.83	47.06	12.61	24.55	8.07
83	ER19a	ExonRegion	0	245.22	572.62	235.06	410.68	46.17	245.40	276.32
84	E19_Da	NovelBoundary	0	12.43	40.72	21.38	39.39	8.46	23.80	8.23
85	E19a_E20a	KnownJunction	0	177.75	413.35	165.73	262.84	37.18	192.07	194.53
86	E20_Aa	NovelBoundary	0	84.37	181.80	77.40	103.27	13.23	78.47	70.90
87	ER20a	ExonRegion	0	187.56	480.40	204.59	317.08	32.62	211.65	226.26
88	E20_Da	NovelBoundary	0	25.20	31.05	29.55	54.40	10.10	25.25	9.75
89	E20a_E21a	KnownJunction	0	182.65	466.79	178.31	283.40	24.78	196.42	241.38
90	I20	Intron	0	20.20	24.04	16.28	23.18	8.90	11.29	4.31
91	I20_AR1	ActiveIntronRegion	0	20.33	24.20	16.39	23.33	8.96	11.37	4.33
92	E21_Aa	NovelBoundary	1	65.89	33.73	52.38	51.55	21.07	28.73	14.23
93	ER21a	ExonRegion	0	194.92	510.71	208.10	290.01	41.69	211.41	217.99
94	E21_Da	NovelBoundary	0	45.35	70.14	36.74	65.53	26.56	54.56	25.05
95	E21a_E22a	KnownJunction	0	138.68	409.15	142.08	293.15	18.67	212.63	161.96
96	I21_AR1	ActiveIntronRegion	0	37.89	45.83	33.78	63.28	16.61	46.72	19.80
97	ER22a	ExonRegion	0	142.22	361.46	136.08	264.08	25.39	159.55	132.50
98	E22_Da	KnownBoundary	0	171.61	383.90	141.19	284.27	28.68	153.35	123.36
99	ER22b	ExonRegion	0	156.46	308.69	149.32	237.72	18.84	177.52	89.42
100	ER22c	ExonRegion	0	15.37	21.06	22.01	8.52	3.51	9.60	6.41
101	ER22d	ExonRegion	0	6.76	3.64	10.57	2.74	1.94	3.19	2.56
102	IG26	Intergenic	0	42.75	39.54	29.49	29.24	5.82	20.37	9.56
103	IG26_SR3	SilentIntergenicRegion	0	26.96	22.42	23.16	17.82	5.35	12.96	6.86
104	IG26_AR3	ActiveIntergenicRegion	0	36.25	42.04	33.72	36.58	9.60	31.23	11.33
105	IG26_SR2	SilentIntergenicRegion	0	58.62	51.96	40.04	51.20	6.88	23.96	12.66
106	IG26_AR2	ActiveIntergenicRegion	0	67.47	62.72	49.35	57.83	7.65	34.77	16.50
107	IG26_SR1	SilentIntergenicRegion	0	47.90	44.77	28.88	28.11	5.26	21.00	9.68
108	IG26_AR1	ActiveIntergenicRegion	0	13.72	16.83	5.76	3.12	2.20	5.69	1.30