Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ADORA2A	Gene	0	25.31	57.02	8.30	9.29	11.70	16.69	1.11
2	358654	Transcript	0	0.91	0.58	0.90	0.47	1.43	0.26	0.21
3	337539	Transcript	0	0.89	0.26	0.69	0.26	0.32	0.00	0.14
4	406084	Transcript	0	24.15	76.32	6.74	12.87	0.00	20.23	2.46
5	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER9a	ExonRegion	0	0.69	0.00	0.20	0.36	0.25	0.00	0.00
22	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER10a	ExonRegion	0	1.94	1.97	1.84	2.10	0.00	0.00	0.00
24	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER11a	ExonRegion	0	18.06	8.19	16.15	7.48	48.23	6.33	5.50
26	E11a_E12a	KnownJunction	0	6.91	4.07	7.19	1.68	1.01	1.66	0.89
27	ER12a	ExonRegion	0	2.17	2.23	1.99	0.49	0.34	0.54	0.24
28	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER13a	ExonRegion	0	1.56	0.98	2.26	1.44	0.00	0.88	0.61
30	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	ER14a	ExonRegion	0	0.27	0.50	1.45	1.52	0.81	0.12	0.02
32	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	ER15a	ExonRegion	0	0.91	2.81	1.34	1.99	0.77	0.00	0.47
34	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	E15a_E21a	NovelJunction	0	0.00	2.97	5.36	9.89	0.00	0.00	0.00
36	Ix	Intron	0	14.09	14.80	11.07	1.67	5.48	1.32	3.79
37	Ix_AR1	ActiveIntronRegion	0	29.67	19.51	18.12	2.92	14.49	1.34	5.88
38	Ix_AR2	ActiveIntronRegion	0	15.42	13.61	12.05	1.25	8.48	0.21	4.04
39	Ix_SR3	SilentIntronRegion	0	15.75	13.32	12.00	1.50	8.16	1.53	4.50
40	Ix_AR5	ActiveIntronRegion	0	13.29	22.64	10.39	3.14	7.17	3.55	5.60
41	Ix_SR6	SilentIntronRegion	0	18.12	27.95	11.39	2.01	6.96	2.91	4.87
42	Ix_SR7	SilentIntronRegion	0	21.48	35.12	14.95	1.10	5.99	0.54	4.90
43	Ix_AR8	ActiveIntronRegion	0	23.70	18.74	9.31	0.66	4.42	0.86	1.52
44	Ix_AR9	ActiveIntronRegion	0	18.43	26.59	11.33	1.73	4.32	1.90	2.98
45	Ix_SR9	SilentIntronRegion	0	19.94	23.83	15.03	2.32	4.88	2.07	4.25
46	Ix_AR10	ActiveIntronRegion	0	10.52	18.12	8.31	2.66	1.85	4.07	3.98
47	Ix_SR10	SilentIntronRegion	0	14.42	6.80	18.34	2.31	5.19	0.77	4.10
48	Ix_SR11	SilentIntronRegion	0	17.96	4.43	8.13	0.00	4.15	0.00	9.76
49	ER16a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
50	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	ER17a	ExonRegion	0	0.18	0.00	0.00	0.00	0.00	0.00	0.00
52	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
53	ER18a	ExonRegion	0	0.23	0.00	0.00	0.00	0.00	0.00	0.00
54	E18_Da	NovelBoundary	0	79.46	96.71	134.89	78.70	90.16	30.52	54.42
55	E18a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
56	I18_AR1	ActiveIntronRegion	0	8.24	6.90	12.33	5.42	5.07	4.93	2.64
57	I18_SR3	SilentIntronRegion	0	4.75	13.63	1.52	2.91	0.72	5.71	0.00
58	ER19a	ExonRegion	0	1.78	0.53	1.38	0.51	0.64	0.01	0.28
59	E19a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
60	ER20a	ExonRegion	0	30.63	60.21	12.70	7.49	6.95	16.51	1.31
61	E20_Ab	KnownBoundary	0	42.04	97.81	10.45	5.91	13.62	23.07	2.49
62	ER20b	ExonRegion	0	33.65	110.02	8.08	11.29	15.03	27.47	2.55
63	E20_Da	KnownBoundary	0	14.94	44.42	4.74	4.33	3.09	13.48	1.40
64	E20a_E20c	KnownJunction	0	24.15	76.32	6.74	12.87	0.00	20.23	2.46
65	E20_Ac	KnownBoundary	0	25.35	59.50	8.28	4.47	8.07	10.91	1.38
66	ER20c	ExonRegion	0	43.80	122.70	12.60	15.71	16.04	28.44	2.70
67	ER20d	ExonRegion	0	66.41	176.49	21.56	20.91	36.29	37.95	3.16
68	E20b_E21a	KnownJunction	0	87.64	183.74	23.14	22.57	35.78	49.82	4.51
69	ER21a	ExonRegion	0	82.47	205.42	22.49	22.96	40.83	46.34	3.33
70	E21_Da	KnownBoundary	0	90.99	227.59	26.61	24.95	40.41	54.97	2.98
71	ER21b	ExonRegion	0	71.90	159.70	22.29	27.31	30.35	49.69	2.66