Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MYH9	Gene	0	1390.42	5506.63	1786.40	5846.97	579.42	788.44	1915.54
2	337818	Transcript	0	392.03	1749.23	334.30	2209.41	0.55	304.79	565.98
3	216181	Transcript	0	0	0	0	0	0	0	0
4	397231	Transcript	0	811.78	3560.02	1000.38	3611.08	207.80	513.00	1101.86
5	358424	Transcript	0	0	0	0	0	0	0	0
6	401701	Transcript	0	10.94	18.43	8.60	0.92	0.39	0.22	1.86
7	IG12_SR1	SilentIntergenicRegion	0	3.61	13.41	2.57	7.90	0.22	1.50	0.27
8	ER1a	ExonRegion	0	479.36	1299.87	498.68	1122.39	124.61	164.80	382.55
9	E1_Ab	KnownBoundary	0	161.38	812.31	112.95	681.67	10.19	129.12	102.46
10	ER1b	ExonRegion	0	137.63	1768.08	176.63	1410.07	40.16	212.18	177.42
11	E1a_E3a	KnownJunction	0	206.49	3091.02	312.81	2515.84	72.48	358.53	330.00
12	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER3a	ExonRegion	0	926.10	6166.07	1426.93	5346.55	386.25	814.51	1538.13
15	E3a_E4a	KnownJunction	0	1387.50	9078.94	2205.99	7643.73	517.67	1045.49	2574.53
16	ER4a	ExonRegion	0	1430.15	8934.58	2222.52	7993.49	665.19	1093.85	2589.52
17	E4a_E5a	KnownJunction	0	1128.71	5409.05	1614.90	5259.28	653.99	696.53	1687.17
18	E5a_E6a	KnownJunction	0	1070.14	5517.71	1642.29	5196.32	616.57	694.25	1775.16
19	ER5a	ExonRegion	0	1452.37	7326.11	2194.17	6935.83	739.80	925.23	2360.28
20	ER6a	ExonRegion	0	1245.37	6952.38	1863.91	6584.32	608.31	821.77	2034.98
21	E6a_E7a	KnownJunction	0	1.84	5.18	0.00	0.00	0.00	0.00	0.00
22	E6a_E8a	KnownJunction	0	1109.25	6299.08	1699.08	6264.65	435.17	760.47	1910.13
23	ER7a	ExonRegion	0	34.53	50.73	24.60	6.82	1.64	1.63	7.84
24	E7_Da	KnownBoundary	0	86.32	115.78	61.79	15.77	3.50	2.95	18.37
25	ER7b	ExonRegion	0	32.83	55.28	25.80	2.77	1.18	0.67	5.59
26	ER8a	ExonRegion	0	1350.81	6148.41	1824.75	6208.12	609.85	759.04	1854.06
27	E8a_E9a	KnownJunction	0	1866.49	6481.72	2607.89	6460.01	740.64	768.40	2466.42
28	ER9a	ExonRegion	0	1784.32	7653.81	2657.81	7910.94	697.98	952.24	2533.70
29	E9a_E10a	KnownJunction	0	1551.83	8092.84	2388.48	8819.13	626.60	1051.01	2483.49
30	ER10a	ExonRegion	0	1594.09	7439.87	2378.83	7316.10	628.96	841.08	2334.61
31	E10a_E11a	KnownJunction	0	1895.71	7495.92	2607.15	7856.20	645.41	988.46	2682.97
32	ER11a	ExonRegion	0	1806.93	6924.52	2484.29	7301.54	595.16	853.72	2557.65
33	E11a_E12a	KnownJunction	0	1899.16	6411.89	2359.97	6734.77	569.73	766.02	2050.43
34	ER12a	ExonRegion	0	1661.83	6705.96	2255.38	6779.20	603.27	834.74	2747.34
35	E12a_E13a	KnownJunction	0	1565.65	6442.62	2256.83	6639.87	628.44	784.24	2467.80
36	ER13a	ExonRegion	0	1730.59	6444.73	2412.36	6497.06	680.79	738.20	2430.60
37	E13a_E14a	KnownJunction	0	1675.70	6206.94	2373.82	6175.90	631.37	647.24	2379.46
38	E14_Aa	NovelBoundary	1	561.32	6.07	823.26	7.78	0.97	0.00	3.87
39	ER14a	ExonRegion	0	1186.02	5942.30	1790.59	6035.18	491.51	690.71	2118.20
40	E14a_E15a	KnownJunction	0	1520.45	6065.50	2266.42	6299.41	568.74	714.83	2342.08
41	ER15a	ExonRegion	0	1408.16	5563.39	2058.71	5820.68	565.04	646.17	2185.48
42	E15a_E16a	KnownJunction	0	1453.39	4283.19	1909.75	4556.02	345.31	537.36	1591.75
43	ER16a	ExonRegion	0	1400.10	5283.94	1957.25	5591.70	519.11	631.76	2066.74
44	E16a_E17a	KnownJunction	0	1489.64	5700.67	2005.87	6051.77	738.11	757.52	2259.58
45	ER17a	ExonRegion	0	1720.80	5281.20	2227.38	5757.14	641.99	657.32	2514.36
46	E17a_E18a	KnownJunction	0	1374.83	5250.03	1698.42	5684.09	466.82	626.63	1959.35
47	ER18a	ExonRegion	0	1495.08	4931.81	1887.27	5159.33	591.25	565.99	1932.17
48	E18a_E19a	KnownJunction	0	1133.93	3838.20	1490.15	4155.56	383.39	445.17	1342.80
49	ER19a	ExonRegion	0	1086.02	4353.18	1469.32	4433.13	432.89	509.89	1515.78
50	E19a_E20a	KnownJunction	0	1347.18	4676.26	1926.10	4604.27	507.37	590.93	1763.27
51	ER20a	ExonRegion	0	1474.74	5220.73	1947.59	5334.09	544.68	644.00	1808.64
52	E20a_E21a	KnownJunction	0	1404.81	5155.69	1723.61	5484.65	562.93	586.16	1745.47
53	ER21a	ExonRegion	0	1220.83	4753.89	1570.19	5213.84	484.67	584.31	1660.83
54	E21a_E22a	KnownJunction	0	1065.97	4411.55	1278.10	4868.79	367.19	536.18	1448.23
55	ER22a	ExonRegion	0	569.98	4092.83	748.36	4471.88	333.55	484.31	1085.31
56	E22a_E23a	KnownJunction	0	530.86	3755.76	687.69	4349.80	200.61	432.28	992.32
57	ER23a	ExonRegion	0	894.13	4869.03	1225.31	5353.93	415.65	581.41	1402.02
58	E23a_E24a	KnownJunction	0	1184.92	5174.45	1443.49	5747.67	425.28	637.11	1476.05
59	ER24a	ExonRegion	0	1248.25	4971.94	1418.89	5475.83	402.01	577.19	1460.57
60	E24a_E25a	KnownJunction	0	1207.13	4156.04	1323.09	4652.52	459.10	530.42	1344.06
61	ER25a	ExonRegion	0	1087.46	4275.74	1347.24	4604.12	401.99	521.97	1364.93
62	E25_Da	KnownBoundary	0	1224.11	4838.75	1671.34	5422.31	443.95	612.99	1629.77
63	E25a_E33b	KnownJunction	0	0.00	1.08	0.00	2.22	0.00	0.00	1.18
64	ER25b	ExonRegion	0	1398.46	5533.18	1902.27	6047.77	464.49	689.24	1815.96
65	E25b_E26a	KnownJunction	0	1511.81	5966.90	2028.23	6437.36	528.35	750.34	1874.87
66	ER26a	ExonRegion	0	1378.38	5909.53	1954.73	6276.02	477.66	735.59	1850.19
67	E26a_E27a	KnownJunction	0	1442.93	6104.93	1877.66	6960.81	357.30	873.75	1866.08
68	ER27a	ExonRegion	0	1288.28	4975.11	1745.54	5408.54	413.38	662.87	1495.65
69	E27a_E28a	KnownJunction	0	1423.52	5162.63	1946.20	5750.93	509.56	779.66	1647.94
70	ER28a	ExonRegion	0	1472.97	5463.67	2185.99	5837.22	540.38	754.31	1725.64
71	E28a_E29a	KnownJunction	0	1504.81	6041.91	2384.53	6440.94	557.69	809.33	1992.84
72	ER29a	ExonRegion	0	1402.67	6109.56	1999.69	6389.21	587.99	791.07	1866.80
73	E29a_E30a	KnownJunction	0	1381.33	5974.34	1805.73	6168.89	614.70	739.27	1859.54
74	ER30a	ExonRegion	0	1310.04	5748.53	1629.34	6017.45	644.88	701.25	1843.91
75	E30a_E31a	KnownJunction	0	1828.42	5507.68	2030.49	5855.09	881.86	600.40	1855.46
76	E31_Aa	NovelBoundary	1	809.61	8.96	810.66	4.98	0.99	1.31	3.97
77	ER31a	ExonRegion	0	1960.84	6229.85	2165.54	6504.00	745.19	708.12	2097.32
78	E31a_E32a	KnownJunction	0	1775.07	6597.44	1888.72	6877.35	638.06	792.17	1847.55
79	ER32a	ExonRegion	0	2330.26	6540.43	2317.08	7007.51	775.64	793.62	2053.25
80	E32a_E33a	KnownJunction	0	2030.81	6326.29	2021.82	6788.19	596.05	805.71	1918.09
81	E33_Aa	NovelBoundary	0	850.39	2368.61	790.89	2490.65	157.82	308.36	617.27
82	ER33a	ExonRegion	0	1703.23	5509.27	1764.31	5944.22	573.46	722.09	1761.21
83	E33_Ab	KnownBoundary	0	1103.61	4645.87	1240.76	5085.49	358.70	624.35	1496.46
84	ER33b	ExonRegion	0	1116.39	4512.90	1379.49	4753.74	410.37	632.47	1474.68
85	E33a_E34a	KnownJunction	0	1159.00	4681.12	1568.85	4739.48	476.55	642.18	1580.86
86	E34_Aa	NovelBoundary	1	444.74	10.56	552.91	3.98	0.95	3.27	4.66
87	ER34a	ExonRegion	0	1055.00	4742.68	1362.83	4972.81	519.68	679.09	1656.27
88	E34_Da	KnownBoundary	0	417.88	1628.72	511.53	1692.06	187.95	230.56	509.93
89	E34a_E34b	KnownJunction	0	811.78	3560.02	1000.38	3611.08	207.80	513.00	1101.86
90	E34_Ab	KnownBoundary	0	479.62	1816.07	581.22	1882.64	172.76	240.77	600.77
91	ER34b	ExonRegion	0	1122.43	4820.96	1361.99	4968.73	478.35	680.43	1516.26
92	ER34c	ExonRegion	0	1551.08	5753.67	1804.91	6180.14	617.88	847.76	1916.76
93	E34b_E35a	KnownJunction	0	1402.82	6574.11	1942.44	7288.37	598.22	1024.53	2091.33
94	ER35a	ExonRegion	0	1444.48	6310.88	1799.65	6792.26	623.33	910.86	2065.02
95	E35a_E36a	KnownJunction	0	1435.22	6322.67	1947.90	7056.83	717.29	906.26	2563.83
96	ER36a	ExonRegion	0	1202.69	6050.70	1728.50	6476.37	609.87	823.58	2202.63
97	E36a_E37a	KnownJunction	0	1276.58	6296.32	1723.41	6577.10	582.36	803.14	2387.50
98	ER37a	ExonRegion	0	1255.27	6557.63	1711.13	6987.30	659.04	932.77	2198.53
99	E37a_E38a	KnownJunction	0	1432.40	6584.15	2017.49	7350.84	684.37	943.83	2338.86
100	ER38a	ExonRegion	0	1295.38	6539.21	1638.16	7090.70	643.99	942.08	2263.97
101	E38a_E39a	KnownJunction	0	1378.69	6535.10	1645.95	7053.41	684.19	883.99	2140.67
102	ER39a	ExonRegion	0	1712.75	7386.73	2070.33	8079.62	893.61	1047.78	2806.89
103	E39a_E40a	KnownJunction	0	2111.79	8718.28	2498.43	9688.73	1378.56	1342.03	3600.04
104	E40_Aa	NovelBoundary	1	748.54	30.16	897.50	19.10	0.90	7.99	9.49
105	ER40a	ExonRegion	0	2219.45	10046.74	2657.93	10883.77	1182.09	1455.59	4161.03
106	E40a_E41a	KnownJunction	0	2370.89	10587.42	2742.05	11058.29	1209.97	1503.55	3828.95
107	ER41a	ExonRegion	0	2244.00	10139.00	2712.66	11082.35	1127.63	1478.78	4083.74
108	E41a_E42a	KnownJunction	0	2076.16	9161.74	2435.76	9668.79	1145.45	1266.10	3996.49
109	ER42a	ExonRegion	0	1442.46	7321.08	1582.49	7957.00	710.96	1141.85	2479.57
110	E42_Da	KnownBoundary	0	482.22	2490.11	514.63	2809.62	293.55	415.93	840.77
111	E42a_E42b	KnownJunction	0	784.06	3497.39	668.59	4416.61	1.11	609.59	1130.79
112	E42_Ab	KnownBoundary	0	865.54	2780.94	880.47	3498.82	410.23	483.68	1288.47
113	ER42b	ExonRegion	0	1346.92	6149.12	1377.80	7349.85	806.29	1034.25	2099.47
114	ER42c	ExonRegion	0	1860.60	6242.39	2059.19	7597.32	989.10	1073.99	2786.55
115	E42_Db	KnownBoundary	0	2210.90	6233.98	2630.35	7570.63	1039.82	1162.92	3381.89
116	ER42d	ExonRegion	0	1864.11	6366.82	2230.07	7647.80	974.18	1194.70	3010.39
117	E42c_E43a	KnownJunction	0	1583.82	6356.09	1958.19	7588.08	861.62	1245.63	2817.30
118	ER43a	ExonRegion	0	1469.66	4193.54	1775.45	4921.73	609.66	918.02	1640.08
119	IG11	Intergenic	0	50.11	7.38	39.41	15.84	0.17	2.70	20.62
120	IG11_SR2	SilentIntergenicRegion	0	30.10	5.61	26.30	8.83	1.36	1.26	8.62
121	IG11_SR1	SilentIntergenicRegion	0	51.22	7.48	40.14	16.23	0.10	2.78	21.27