Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	LRP5L	Gene	0	5.33	14.74	5.75	16.28	12.50	16.15	5.85
2	402785	Transcript	0	0.32	1.01	0.44	0.75	0.74	0.80	0.36
3	402859	Transcript	0	3.64	9.66	2.86	13.01	6.48	14.83	2.82
4	215872	Transcript	0	3.14	6.10	2.62	4.27	7.14	2.41	4.20
5	IG44_AR16	ActiveIntergenicRegion	0	7.55	29.22	11.28	59.16	36.32	45.57	31.16
6	IG44_AR14	ActiveIntergenicRegion	0	12.32	39.13	15.64	63.86	24.61	53.76	18.89
7	ER1a	ExonRegion	0	0.00	0.50	0.09	0.35	0.22	0.84	0.09
8	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER2a	ExonRegion	0	1.49	2.79	1.79	3.41	0.52	3.28	0.16
10	E2_Ab	KnownBoundary	0	4.61	4.70	3.09	7.53	1.06	8.09	1.61
11	ER2b	ExonRegion	0	3.17	34.99	9.39	24.60	10.95	32.02	6.15
12	E2a_E3a	KnownJunction	0	0.93	35.55	6.80	26.58	4.56	43.68	3.81
13	ER3a	ExonRegion	0	4.96	30.68	9.17	35.27	12.35	55.67	7.71
14	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E3a_E5b	KnownJunction	0	5.52	18.23	3.49	26.25	12.61	34.49	4.87
16	E3a_E7a	NovelJunction	0	0.00	6.67	0.00	8.05	0.00	4.69	0.00
17	ER4a	ExonRegion	0	0.44	2.76	0.76	0.72	3.72	0.71	1.91
18	E4a_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	I4_AR4	ActiveIntronRegion	0	5.11	3.26	3.60	3.00	7.53	1.08	4.18
20	I4_AR5	ActiveIntronRegion	0	3.73	8.21	3.80	4.82	8.58	2.20	8.24
21	I4_AR6	ActiveIntronRegion	0	3.64	3.84	1.68	0.00	10.48	0.00	3.85
22	I4_AR7	ActiveIntronRegion	0	4.97	4.24	2.47	2.49	9.17	3.05	4.69
23	E5_Aa	NovelBoundary	0	0.00	4.05	5.52	2.93	11.76	1.29	4.34
24	ER5a	ExonRegion	0	3.14	6.10	2.62	4.27	7.14	2.41	4.20
25	E5_Ab	KnownBoundary	1	4.04	9.77	2.01	6.20	9.94	0.00	5.73
26	ER5b	ExonRegion	0	13.30	34.18	11.93	62.50	31.75	50.87	13.79
27	E5a_E6a	KnownJunction	0	21.60	22.20	13.92	31.02	27.99	27.04	14.53
28	E5a_E7a	NovelJunction	0	1.94	14.58	0.60	22.59	0.00	29.51	0.00
29	ER6a	ExonRegion	0	15.17	26.88	10.30	31.80	33.44	27.34	11.06
30	E6a_E7a	KnownJunction	0	13.67	32.39	14.28	33.21	33.63	30.50	17.44
31	ER7a	ExonRegion	0	15.78	43.59	21.33	51.86	37.38	49.19	14.17
32	E7a_E8a	KnownJunction	0	11.30	34.39	22.63	51.23	27.48	51.83	5.92
33	E7a_E8b	KnownJunction	0	4.01	10.75	3.87	11.54	5.21	7.05	2.24
34	ER8a	ExonRegion	0	12.62	37.50	16.81	42.24	31.48	38.13	10.97
35	E8_Ab	KnownBoundary	0	26.70	38.86	25.85	32.29	19.92	22.70	8.60
36	ER8b	ExonRegion	0	11.97	38.32	14.66	35.50	23.24	43.77	11.27
37	E8_Da	KnownBoundary	0	4.39	19.78	10.35	25.09	22.43	37.68	8.07
38	ER8c	ExonRegion	1	6.87	15.95	8.71	10.67	17.72	28.29	5.59
39	ER8d	ExonRegion	0	1.38	0.00	1.22	1.25	1.62	2.94	1.35