Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC016026.15	Gene	0	68.86	135.72	133.98	220.12	28.95	55.89	68.32
2	252134	Transcript	0	44.54	120.81	101.08	181.85	19.47	40.59	56.68
3	ER1a	ExonRegion	1	12.48	64.51	32.36	83.48	9.19	17.86	7.59
4	E1a_E2a	KnownJunction	0	1.92	11.19	14.87	24.38	0.00	4.18	1.36
5	E1a_E3a	NovelJunction	1	42.23	95.63	47.87	159.19	48.13	18.14	40.87
6	E1a_E4a	NovelJunction	0	6.89	63.00	5.37	50.42	0.00	18.97	8.03
7	I1_AR1	ActiveIntronRegion	1	12.50	13.62	22.09	10.01	2.35	1.33	15.07
8	ER2a	ExonRegion	0	5.98	19.07	14.54	34.40	1.21	2.91	6.35
9	E2a_E3a	KnownJunction	1	4.36	20.99	22.36	46.22	0.00	7.64	5.42
10	I2_AR1	ActiveIntronRegion	1	7.57	6.23	16.15	9.38	1.41	3.37	14.92
11	ER3a	ExonRegion	0	34.76	96.57	98.51	181.70	16.17	38.90	54.56
12	E3a_E4a	KnownJunction	0	64.71	129.39	148.16	261.65	23.81	53.12	89.60
13	ER4a	ExonRegion	0	73.57	175.06	160.86	256.84	26.23	60.34	80.58
14	E4a_E5a	KnownJunction	0	86.80	169.90	186.67	232.88	36.10	45.26	74.90
15	ER5a	ExonRegion	0	68.64	169.13	145.56	226.98	20.92	48.29	69.26
16	E5a_E6a	KnownJunction	0	60.97	155.79	142.12	250.94	12.84	42.69	66.54
17	ER6a	ExonRegion	0	33.33	92.20	70.37	159.28	10.57	31.87	38.75
18	E6a_E7a	KnownJunction	0	35.20	123.16	112.49	186.77	17.31	41.11	57.02
19	ER7a	ExonRegion	0	31.68	113.97	87.57	182.36	11.01	40.86	46.97
20	E7a_E8a	KnownJunction	0	32.09	106.11	37.87	135.62	1.18	26.85	29.65
21	E8_Aa	NovelBoundary	1	6.26	5.70	12.78	5.42	3.11	4.48	20.29
22	ER8a	ExonRegion	0	38.41	118.32	84.91	197.75	18.49	45.20	53.66
23	E8a_E9a	KnownJunction	0	28.01	106.87	75.19	190.26	17.87	30.34	37.76
24	E8a_E10a	NovelJunction	1	3.42	7.86	6.31	32.40	0.00	19.70	4.59
25	ER9a	ExonRegion	0	20.47	91.50	66.20	127.44	10.35	33.87	37.63
26	E9a_E10a	KnownJunction	0	38.32	131.70	89.51	145.86	22.13	37.57	73.96
27	I9	Intron	0	21.51	14.91	21.21	10.05	3.38	4.03	9.64
28	I9_AR1	ActiveIntronRegion	0	19.47	14.58	23.60	11.01	1.62	2.66	8.99
29	I9_AR2	ActiveIntronRegion	0	22.09	17.86	27.34	15.18	3.22	7.20	14.64
30	I9_AR3	ActiveIntronRegion	0	24.66	16.35	30.48	16.55	8.25	4.90	18.21
31	I9_SR2	SilentIntronRegion	0	26.80	14.19	28.86	11.79	4.74	4.22	7.78
32	I9_AR4	ActiveIntronRegion	0	23.12	7.99	22.36	11.08	3.11	3.35	6.23
33	I9_AR5	ActiveIntronRegion	0	39.22	17.81	39.54	15.02	4.70	4.91	10.90
34	I9_AR6	ActiveIntronRegion	0	12.91	8.26	29.50	22.32	4.09	7.42	3.68
35	I9_SR4	SilentIntronRegion	0	25.46	21.37	28.18	9.48	4.16	3.83	12.16
36	I9_AR7	ActiveIntronRegion	0	37.94	17.40	42.04	14.53	6.57	9.38	19.23
37	I9_SR5	SilentIntronRegion	0	33.88	16.73	35.29	7.35	3.95	0.70	14.47
38	I9_AR8	ActiveIntronRegion	0	19.60	11.72	20.59	7.90	2.35	4.90	10.19
39	I9_SR6	SilentIntronRegion	0	33.79	11.33	28.83	14.07	4.56	8.29	14.47
40	I9_AR9	ActiveIntronRegion	0	16.97	8.59	18.24	6.18	3.49	4.00	6.88
41	I9_AR10	ActiveIntronRegion	0	31.53	21.46	27.30	14.04	4.42	8.49	12.68
42	I9_SR8	SilentIntronRegion	0	38.78	16.24	24.60	5.78	7.80	3.20	8.95
43	I9_AR11	ActiveIntronRegion	0	41.19	17.02	32.26	9.85	4.86	4.65	7.71
44	I9_SR9	SilentIntronRegion	0	25.14	11.15	16.35	12.93	4.24	3.46	5.25
45	I9_SR11	SilentIntronRegion	0	20.41	15.72	19.65	9.67	3.09	3.56	9.87
46	I9_SR12	SilentIntronRegion	1	15.51	27.55	9.79	9.42	3.99	6.02	12.07
47	I9_AR15	ActiveIntronRegion	0	17.30	17.14	15.72	10.15	4.11	4.72	8.77
48	E10_Aa	NovelBoundary	0	27.97	17.86	44.69	4.17	1.18	3.81	11.42
49	ER10a	ExonRegion	0	59.51	173.12	119.27	242.26	33.38	62.72	83.78
50	E10a_E11a	KnownJunction	0	58.90	174.94	115.71	224.96	36.82	60.22	71.17
51	ER11a	ExonRegion	0	56.20	177.76	135.90	242.50	39.34	65.36	99.16
52	E11a_E12a	KnownJunction	0	79.16	190.13	179.49	276.98	39.74	61.59	127.08
53	ER12a	ExonRegion	0	98.97	167.35	184.26	271.01	43.07	74.86	90.94