Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ZGPAT	Gene	0	31.40	72.24	43.92	54.07	37.89	58.07	32.33
2	355969	Transcript	0	13.36	20.07	11.37	9.01	9.66	8.92	10.83
3	328969	Transcript	0	6.46	14.50	4.41	5.02	4.88	5.14	3.16
4	369967	Transcript	0	0	0	0	0	0	0	0
5	357119	Transcript	1	2.60	7.20	4.30	16.69	8.37	5.17	6.22
6	ER1a	ExonRegion	0	0.00	1.94	0.00	0.00	0.00	0.00	0.00
7	ER1b	ExonRegion	0	0.22	3.30	0.00	1.78	0.23	0.96	0.87
8	ER1c	ExonRegion	0	14.51	24.60	12.41	16.50	24.13	16.67	17.37
9	E1_Da	KnownBoundary	0	7.04	8.75	10.76	4.23	21.53	3.51	4.07
10	E1a_E2a	KnownJunction	0	26.72	38.20	22.75	18.02	19.32	17.85	21.67
11	ER1d	ExonRegion	0	0.11	3.78	1.40	1.71	6.84	1.10	1.50
12	E1b_E2a	KnownJunction	0	0.00	3.73	0.63	3.28	7.33	1.26	2.22
13	ER2a	ExonRegion	0	31.38	67.78	43.45	55.76	34.70	60.05	28.07
14	E2a_E3a	KnownJunction	0	70.33	120.77	87.77	91.19	85.57	92.57	51.64
15	E2a_E4a	NovelJunction	0	0.00	2.65	0.00	1.33	0.00	10.26	0.73
16	E3_Aa	NovelBoundary	1	27.10	3.23	36.43	0.00	3.80	16.54	3.77
17	ER3a	ExonRegion	0	58.99	117.80	76.07	85.22	76.80	82.49	59.18
18	E3a_E4a	KnownJunction	0	53.07	118.27	77.34	95.71	95.07	74.42	49.43
19	ER4a	ExonRegion	0	43.33	110.83	58.94	80.16	78.68	73.86	51.37
20	E4_Da	NovelBoundary	0	35.68	81.65	36.93	56.30	62.38	53.73	51.41
21	E4a_E5b	KnownJunction	0	2.60	7.20	4.30	16.69	8.37	5.17	6.22
22	E4_Db	NovelBoundary	0	5.56	8.22	7.03	19.37	6.36	16.21	6.91
23	E4b_E5a	KnownJunction	0	2.62	3.99	1.57	1.25	0.00	0.00	0.00
24	E4b_E5b	KnownJunction	0	20.45	66.31	43.15	42.45	49.19	30.74	35.80
25	ER4b	ExonRegion	0	30.31	81.89	44.58	47.43	63.53	38.73	44.55
26	I4	Intron	1	8.60	13.69	8.52	10.58	10.36	16.11	11.01
27	I4_AR1	ActiveIntronRegion	0	3.85	6.74	4.41	11.64	8.13	6.73	3.39
28	I4_AR2	ActiveIntronRegion	1	8.22	11.59	6.36	15.63	10.96	9.34	11.00
29	I4_AR3	ActiveIntronRegion	1	7.94	12.55	7.63	10.97	12.26	8.01	11.24
30	I4_AR4	ActiveIntronRegion	1	9.48	14.98	8.24	12.68	9.31	10.42	11.02
31	I4_AR5	ActiveIntronRegion	1	10.05	11.20	9.06	10.90	8.67	12.62	10.39
32	I4_AR6	ActiveIntronRegion	1	9.14	14.70	9.07	10.33	10.67	17.77	11.95
33	E5_Aa	NovelBoundary	0	7.54	24.04	11.98	11.89	9.13	18.84	12.87
34	ER5a	ExonRegion	0	10.30	25.01	7.25	8.79	9.76	10.27	6.31
35	E5_Ab	KnownBoundary	0	17.51	37.80	11.18	16.90	10.35	21.52	10.35
36	ER5b	ExonRegion	0	45.45	124.30	69.71	76.89	59.15	72.58	55.37
37	E5a_E6a	KnownJunction	0	38.39	93.92	49.92	68.84	40.37	64.32	42.87
38	ER6a	ExonRegion	0	40.50	82.77	52.64	65.24	36.31	71.41	35.79
39	E6a_E7a	KnownJunction	0	18.71	83.60	38.17	71.11	28.26	66.73	29.22
40	ER7a	ExonRegion	0	16.62	53.35	31.74	38.43	22.83	51.55	25.39
41	ER7b	ExonRegion	0	0.77	2.43	3.39	0.00	1.62	4.90	0.67
42	IG24	Intergenic	0	5.61	7.80	7.24	5.68	5.43	9.24	12.03
43	IG24_AR1	ActiveIntergenicRegion	0	5.63	7.83	7.27	5.71	5.45	9.27	12.08