Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	LSM14B	Gene	0	27.32	29.40	30.89	28.72	121.90	25.88	39.94
2	370915	Transcript	0	4.47	2.97	4.50	2.10	25.28	2.80	3.26
3	279068	Transcript	0	0	0	0	0	0	0	0
4	253001	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	370908	Transcript	0	0	0	0	0	0	0	0
6	361670	Transcript	1	7.83	10.38	20.32	30.72	37.51	25.97	27.67
7	400318	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	279069	Transcript	0	0	0	0	0	0	0	0
9	370906	Transcript	0	4.48	0.00	4.72	0.00	0.00	0.00	0.00
10	IG27_AR1	ActiveIntergenicRegion	0	4.45	1.45	8.96	6.44	1.74	6.75	0.67
11	ER1a	ExonRegion	0	0.00	0.71	0.00	1.03	0.00	0.00	0.48
12	ER1b	ExonRegion	0	0.00	1.21	0.00	1.25	1.28	0.00	1.28
13	E1_Ac	KnownBoundary	0	0.00	1.26	0.00	1.19	1.08	0.00	1.55
14	ER1c	ExonRegion	0	28.89	34.09	28.91	39.56	91.81	28.45	32.65
15	E1a_E3a	KnownJunction	0	78.59	117.72	77.86	95.47	131.36	92.78	89.57
16	ER2a	ExonRegion	0	0.00	0.00	0.59	0.00	0.00	0.00	0.00
17	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER3a	ExonRegion	0	66.47	99.74	73.95	101.29	200.74	79.49	112.02
19	E3a_E4a	KnownJunction	0	62.15	67.65	80.03	70.49	277.37	63.33	97.30
20	E4_Aa	NovelBoundary	0	17.57	25.59	16.08	24.79	113.60	23.99	28.91
21	ER4a	ExonRegion	0	34.17	60.20	47.02	51.82	183.69	48.12	75.51
22	E4a_E5a	KnownJunction	1	11.63	17.52	28.31	26.06	64.32	28.33	41.93
23	E4a_E7a	KnownJunction	0	14.42	43.82	24.36	23.14	128.01	27.31	39.70
24	E4a_E8a	NovelJunction	0	0.73	0.00	0.00	1.16	34.35	0.00	1.72
25	I4	Intron	0	5.55	4.42	3.65	0.44	26.00	0.21	2.80
26	I4_AR2	ActiveIntronRegion	1	0.77	8.10	4.06	0.55	21.42	0.00	3.30
27	I4_AR3	ActiveIntronRegion	0	7.70	4.78	4.32	0.49	31.97	0.31	3.27
28	ER5a	ExonRegion	0	15.43	19.86	27.11	37.30	77.27	24.48	40.48
29	E5_Da	KnownBoundary	0	3.29	3.73	3.46	4.25	24.55	0.00	2.35
30	E5a_E6a	KnownJunction	0	3.69	0.00	7.65	1.68	1.04	1.34	0.00
31	E5a_E7a	KnownJunction	1	7.83	10.38	20.32	30.72	37.51	25.97	27.67
32	ER5b	ExonRegion	0	3.25	2.97	4.48	2.50	32.42	1.27	5.37
33	E5_Db	KnownBoundary	0	5.34	5.36	2.59	6.39	20.54	2.52	5.92
34	E5b_E8b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	ER5c	ExonRegion	0	4.47	2.97	4.50	2.10	25.28	2.80	3.26
36	ER6a	ExonRegion	0	3.31	0.81	9.35	4.84	17.73	2.93	0.49
37	E6a_E7a	KnownJunction	0	2.34	0.97	5.20	4.33	8.53	3.30	0.00
38	ER7a	ExonRegion	0	45.74	69.75	49.59	64.41	191.09	48.57	82.65
39	E7a_E8a	KnownJunction	0	39.02	54.85	42.19	39.66	170.52	43.71	59.76
40	E7a_E9a	KnownJunction	1	5.01	2.31	4.80	10.92	0.00	1.61	16.80
41	ER8a	ExonRegion	0	46.82	61.53	48.19	41.74	231.45	63.36	68.64
42	E8a_E9a	KnownJunction	0	69.30	77.05	67.12	54.99	318.98	54.46	81.89
43	ER8b	ExonRegion	0	63.01	74.92	64.07	51.33	289.79	61.20	83.03
44	ER9a	ExonRegion	0	65.26	87.73	77.36	63.33	259.55	63.15	82.00
45	E9_Da	KnownBoundary	0	70.40	100.30	81.15	59.25	294.15	78.84	64.91
46	ER9b	ExonRegion	0	64.71	69.51	80.62	48.77	259.35	47.80	74.85
47	E9_Db	NovelBoundary	0	38.07	24.48	42.51	24.57	76.72	14.55	54.29
48	E9b_E12b	KnownJunction	0	13.44	0.00	13.58	0.00	0.00	0.00	0.00
49	E9c_E12b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
50	E9d_E10a	KnownJunction	0	50.89	45.53	55.54	61.58	250.45	40.15	78.36
51	ER9c	ExonRegion	0	56.10	46.16	63.67	47.38	238.10	30.24	80.28
52	ER9d	ExonRegion	0	54.03	47.38	68.52	55.83	238.03	35.18	81.21
53	ER10a	ExonRegion	0	39.41	36.57	59.06	45.41	168.89	30.56	49.37
54	E10a_E11a	KnownJunction	0	23.58	27.51	27.82	34.22	135.23	34.68	32.17
55	ER11a	ExonRegion	0	26.70	33.64	36.71	34.32	134.69	27.07	44.79
56	E11_Da	KnownBoundary	0	29.22	31.71	47.22	41.23	191.96	33.63	53.81
57	ER11b	ExonRegion	0	21.65	24.35	29.89	25.55	138.54	23.76	33.96
58	E11b_E12a	KnownJunction	0	19.41	28.35	21.24	17.18	140.99	20.13	22.73
59	ER12a	ExonRegion	0	41.56	24.92	37.00	18.84	158.42	25.87	41.75
60	E12_Ab	KnownBoundary	1	33.91	11.80	29.57	10.27	144.84	28.30	34.09
61	ER12b	ExonRegion	0	33.96	19.36	40.66	13.72	177.86	26.44	48.28
62	E12_Da	KnownBoundary	0	20.43	17.71	35.80	14.20	172.14	16.86	37.38
63	ER12c	ExonRegion	1	33.08	14.11	26.95	6.33	130.17	23.09	30.43
64	E12_Db	KnownBoundary	0	20.19	8.46	15.09	3.49	89.72	8.87	26.81
65	ER12d	ExonRegion	0	19.99	13.32	19.80	14.65	114.74	15.37	29.85