Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 PHACTR3 Gene 0 0.16 0.25 0.01 0.10 0.27 0.00 40.31 2 359926 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 395637 Transcript 0 0 0 0 0 0 0 0 4 395639 Transcript 0 0 0 0 0 0 0 0 5 371015 Transcript 0 0 0 0 0 0 0 0 6 355648 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 395636 Transcript 0 0 0 0 0 0 0 0 8 361300 Transcript 0 0 0 0 0 0 0 0 9 371010 Transcript 0 0.36 0.28 0.00 0.00 0.00 0.00 35.22 10 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E1a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E2a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER5a ExonRegion 0 0.36 0.00 0.00 0.00 0.25 0.00 0.00 19 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER6a ExonRegion 0 0.00 0.47 0.00 0.00 0.00 0.00 0.00 21 E6a_E7a KnownJunction 0 0.00 1.60 0.00 0.00 0.00 0.00 0.00 22 ER7a ExonRegion 0 0.00 0.81 0.00 0.49 0.71 0.00 0.00 23 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 2.35 0.00 0.00 24 E7a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 0.58 0.00 0.00 26 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 2.28 0.00 0.00 27 ER9a ExonRegion 0 0.00 0.00 0.00 0.00 0.20 0.00 0.00 28 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER10a ExonRegion 0 0.00 0.00 0.00 0.76 0.00 0.00 0.00 30 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER11a ExonRegion 0 0.00 0.00 0.00 0.00 0.54 0.00 0.28 32 E11a_E12b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.62 33 E12_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 26.34 34 ER12a ExonRegion 0 0.72 0.56 0.00 0.00 0.00 0.00 70.44 35 E12_Ab KnownBoundary 0 2.07 0.00 0.00 0.00 0.00 0.00 62.84 36 ER12b ExonRegion 0 0.60 0.00 0.00 0.00 0.75 0.00 114.78 37 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 149.81 38 ER13a ExonRegion 0 0.22 1.12 0.00 0.00 1.48 0.00 154.81 39 E13a_E14a KnownJunction 0 0.82 1.21 0.00 0.00 2.07 0.00 130.32 40 ER14a ExonRegion 0 0.59 0.78 0.00 0.00 0.82 0.00 150.42 41 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 95.29 42 I14 Intron 0 0.71 0.14 0.27 0.00 0.00 0.00 10.26 43 I14_SR1 SilentIntronRegion 0 0.70 0.17 0.28 0.00 0.00 0.00 10.83 44 ER15a ExonRegion 0 0.00 0.00 0.00 0.00 0.95 0.00 164.22 45 E15a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.99 0.00 162.12 46 ER16a ExonRegion 0 0.10 0.47 0.09 0.16 0.43 0.00 106.82 47 ER16b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 7.42 48 ER17a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00