Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	KIAA0907	Gene	0	91.43	235.73	126.91	325.66	127.24	250.09	64.19
2	368320	Transcript	0	23.23	39.01	18.37	28.82	43.40	21.71	15.60
3	368321	Transcript	1	58.73	162.09	117.18	432.35	98.80	304.39	58.30
4	368319	Transcript	1	32.03	103.85	47.03	58.95	46.34	43.04	29.62
5	IG22	Intergenic	0	5.78	8.39	3.60	15.38	0.44	35.29	8.10
6	IG22_SR1	SilentIntergenicRegion	0	5.85	8.45	3.65	15.51	0.44	35.72	8.21
7	ER1a	ExonRegion	0	0.77	12.55	2.94	32.01	12.42	15.53	6.07
8	ER1b	ExonRegion	0	9.57	69.80	18.15	121.16	75.05	64.82	21.59
9	ER1c	ExonRegion	0	38.40	128.64	40.70	205.72	109.18	109.41	38.78
10	E1a_E2a	KnownJunction	0	81.88	184.58	77.47	269.15	33.50	146.46	59.05
11	ER2a	ExonRegion	0	94.15	290.24	102.53	415.80	80.12	284.16	56.64
12	E2a_E3a	KnownJunction	0	191.60	598.52	210.58	781.31	255.03	579.54	97.78
13	ER3a	ExonRegion	0	147.95	673.98	226.89	873.09	171.63	660.55	117.21
14	E3a_E4a	KnownJunction	0	170.96	541.56	232.15	755.87	185.99	576.03	101.12
15	ER4a	ExonRegion	0	196.60	662.87	283.22	871.44	207.77	654.39	147.81
16	E4a_E5a	KnownJunction	0	190.78	693.88	288.50	890.32	231.22	712.26	173.45
17	E4a_E7a	NovelJunction	0	5.72	18.02	9.69	10.43	2.05	6.54	0.00
18	E4a_E8a	NovelJunction	1	0.75	1.52	0.59	0.00	0.00	9.41	0.00
19	ER5a	ExonRegion	0	160.86	633.88	283.81	868.07	207.57	657.57	144.86
20	E5_Da	NovelBoundary	0	26.00	19.89	15.79	20.18	9.57	11.44	7.22
21	E5a_E6a	KnownJunction	0	112.61	490.88	226.62	738.31	182.69	495.93	102.17
22	E5a_E7a	NovelJunction	0	6.58	41.54	17.49	52.37	13.00	27.66	9.77
23	I5_SR1	SilentIntronRegion	0	19.18	20.82	10.50	16.37	7.29	13.53	8.32
24	ER6a	ExonRegion	0	139.74	474.76	241.36	708.69	248.28	469.30	124.47
25	E6a_E7a	KnownJunction	0	151.29	444.72	252.01	617.43	190.23	382.03	101.57
26	ER7a	ExonRegion	0	209.69	547.36	330.96	801.76	287.40	562.10	130.60
27	E7a_E8a	KnownJunction	0	267.59	533.60	397.27	850.12	282.47	579.36	122.00
28	ER8a	ExonRegion	0	219.75	542.54	358.34	842.68	256.48	628.55	130.71
29	E8a_E9a	KnownJunction	0	145.92	500.89	249.96	776.24	257.29	588.74	123.19
30	I8	Intron	0	27.74	12.50	15.37	7.85	5.11	5.65	4.51
31	I8_AR1	ActiveIntronRegion	1	32.49	12.87	14.66	7.93	5.58	5.70	4.70
32	I8_SR2	SilentIntronRegion	0	37.44	17.32	22.15	11.74	6.16	8.65	5.58
33	I8_AR2	ActiveIntronRegion	0	27.16	20.21	20.89	11.65	9.48	8.33	6.85
34	E9_Aa	NovelBoundary	0	26.19	45.37	19.70	26.01	4.54	31.92	14.45
35	ER9a	ExonRegion	0	174.55	594.19	301.00	902.26	316.04	626.46	150.20
36	E9_Da	NovelBoundary	0	48.20	28.48	29.06	17.88	8.35	8.20	13.61
37	E9a_E10a	KnownJunction	0	158.90	467.71	267.02	801.00	178.24	566.41	117.90
38	E9a_E10b	KnownJunction	1	32.03	103.85	47.03	58.95	46.34	43.04	29.62
39	I9	Intron	1	26.29	33.34	18.79	10.56	14.90	18.05	19.42
40	I9_AR1	ActiveIntronRegion	1	22.46	20.79	17.99	4.99	9.81	13.49	16.42
41	I9_SR2	SilentIntronRegion	1	24.72	23.28	21.45	6.03	12.69	15.32	21.25
42	I9_AR2	ActiveIntronRegion	1	28.46	37.41	20.01	11.94	16.74	19.82	20.99
43	E10_Aa	NovelBoundary	0	32.21	28.45	28.74	25.98	6.73	27.98	36.63
44	ER10a	ExonRegion	0	166.25	533.63	255.30	839.62	193.84	630.84	119.22
45	E10_Ab	KnownBoundary	0	131.63	377.34	168.71	639.73	99.20	399.37	75.35
46	ER10b	ExonRegion	0	123.75	436.41	162.29	564.84	164.59	394.23	116.97
47	E10_Da	NovelBoundary	0	42.51	85.54	46.34	156.07	41.52	82.76	28.18
48	E10b_E11a	KnownJunction	0	65.51	179.04	99.16	288.14	82.78	180.50	56.59
49	ER10c	ExonRegion	0	69.62	192.19	93.82	311.37	88.03	180.10	61.46
50	I10_AR1	ActiveIntronRegion	1	22.21	17.44	15.57	15.96	13.01	4.67	12.97
51	I10_AR1	ActiveIntronRegion	1	15.70	27.19	23.87	20.47	11.24	13.80	16.74
52	ER11a	ExonRegion	0	44.58	121.48	58.73	205.13	85.68	129.35	39.95
53	E11a_E12a	KnownJunction	0	20.14	98.65	48.56	224.80	60.26	160.18	26.31
54	I11	Intron	1	35.94	31.57	26.58	20.70	19.43	14.00	21.23
55	I11_AR1	ActiveIntronRegion	1	36.03	31.66	26.65	20.75	19.48	14.04	21.28
56	E12_Aa	NovelBoundary	1	18.21	29.32	12.11	22.40	14.89	10.64	27.97
57	ER12a	ExonRegion	0	43.28	167.51	69.52	299.08	83.54	195.76	45.54
58	E12a_E13a	KnownJunction	0	58.15	237.02	114.09	408.59	114.85	302.76	52.70
59	ER13a	ExonRegion	0	93.40	229.69	150.47	440.54	131.21	329.41	81.37
60	E13_Da	KnownBoundary	1	46.80	83.88	34.86	35.71	64.02	25.22	27.42
61	E13a_E13b	KnownJunction	0	58.73	162.09	117.18	432.35	98.80	304.39	58.30
62	ER13b	ExonRegion	1	45.68	65.46	33.80	25.64	74.38	27.89	25.13
63	E13_Ab	KnownBoundary	1	41.88	69.72	24.43	20.35	57.98	27.60	24.21
64	ER13c	ExonRegion	0	100.09	215.59	153.96	335.06	131.63	293.54	68.35