Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 ASH1L Gene 0 133.23 120.71 194.67 230.75 51.54 244.43 70.17 2 368346 Transcript 1 16.76 10.32 22.83 26.34 5.19 49.45 6.41 3 392403 Transcript 0 83.62 93.03 180.05 207.08 33.06 186.98 58.54 4 IG12_AR5 ActiveIntergenicRegion 0 6.30 5.26 5.83 1.43 15.04 5.35 3.93 5 IG12_AR4 ActiveIntergenicRegion 0 5.63 5.82 3.54 2.28 11.87 1.96 3.84 6 IG12_SR2 SilentIntergenicRegion 0 6.77 6.74 5.20 2.22 14.99 1.75 1.93 7 IG12_SR1 SilentIntergenicRegion 0 9.12 8.44 8.15 7.76 15.93 7.91 2.81 8 IG12_AR1 ActiveIntergenicRegion 0 5.15 10.27 5.06 4.88 8.67 4.52 1.47 9 ER1a ExonRegion 0 0.00 0.00 0.00 2.49 0.00 0.00 0.00 10 ER1b ExonRegion 0 14.66 22.99 11.30 29.16 4.44 33.99 4.54 11 E1a_E2a KnownJunction 0 23.23 34.05 25.98 61.82 9.75 56.98 10.55 12 I1_AR2 ActiveIntronRegion 1 33.60 5.91 17.64 3.59 8.67 0.82 3.13 13 I1_AR3 ActiveIntronRegion 0 45.00 7.23 21.33 4.29 5.99 4.65 6.62 14 ER2a ExonRegion 0 132.10 118.35 174.20 186.74 35.09 160.18 44.42 15 E2a_E3a KnownJunction 0 88.72 90.98 142.22 189.94 36.29 136.46 38.14 16 ER3a ExonRegion 0 148.79 141.10 220.41 216.28 61.34 208.41 69.55 17 E3a_E4a KnownJunction 0 101.68 93.55 166.71 211.69 32.53 214.21 60.26 18 E3a_E5a NovelJunction 1 0.00 1.26 2.97 3.68 0.00 16.91 0.00 19 I3_SR1 SilentIntronRegion 0 10.82 5.79 7.41 2.81 12.35 1.93 2.87 20 I3_AR1 ActiveIntronRegion 0 15.65 14.00 3.26 3.01 17.12 3.58 1.87 21 I3_AR2 ActiveIntronRegion 0 24.95 19.22 6.61 8.29 28.68 4.90 2.70 22 I3_AR3 ActiveIntronRegion 0 25.45 20.12 12.11 11.30 35.58 4.90 1.60 23 I3_AR4 ActiveIntronRegion 0 20.85 8.75 10.96 11.31 29.84 2.72 3.45 24 I3_AR5 ActiveIntronRegion 0 28.96 16.46 14.51 9.39 28.38 7.38 3.15 25 ER4a ExonRegion 0 115.85 97.47 183.84 235.52 40.17 209.62 58.52 26 E4a_E5a KnownJunction 0 84.90 108.82 156.79 236.94 29.21 192.05 60.28 27 I4_AR1 ActiveIntronRegion 0 26.93 8.93 12.82 9.80 6.07 4.40 7.34 28 ER5a ExonRegion 0 129.59 135.69 192.42 292.40 48.12 288.86 83.17 29 E5a_E6a KnownJunction 0 78.89 120.69 141.79 239.67 21.07 247.12 64.19 30 E5a_E7a NovelJunction 0 6.28 5.88 10.58 6.58 3.04 16.62 5.80 31 ER6a ExonRegion 0 104.01 112.13 179.85 269.09 33.73 274.41 65.82 32 E6a_E7a KnownJunction 0 83.93 81.39 174.23 184.33 22.98 163.32 50.88 33 ER7a ExonRegion 0 87.83 90.12 194.15 202.48 34.05 194.28 64.48 34 E7a_E8a KnownJunction 0 0.00 0.00 0.73 0.00 0.00 0.00 0.00 35 E7a_E8b KnownJunction 0 83.62 93.03 180.05 207.08 33.06 186.98 58.54 36 ER8a ExonRegion 0 6.53 6.45 13.72 12.00 2.33 14.48 4.13 37 ER8b ExonRegion 0 102.50 114.33 216.19 211.45 34.01 234.17 73.92 38 E8a_E9a KnownJunction 0 92.73 97.57 199.73 214.91 37.78 212.47 76.04 39 ER9a ExonRegion 0 85.26 127.03 226.97 234.32 47.46 210.29 76.65 40 E9a_E10a KnownJunction 0 69.41 133.22 187.46 199.36 46.52 176.64 59.95 41 ER10a ExonRegion 0 90.72 149.36 171.61 239.05 39.10 231.09 79.29 42 E10a_E11a KnownJunction 0 89.06 147.83 153.55 235.26 41.43 259.10 79.64 43 ER11a ExonRegion 0 112.95 167.90 192.82 294.60 53.15 272.66 78.41 44 E11a_E12a KnownJunction 0 108.73 139.79 187.10 336.63 55.30 290.86 75.83 45 ER12a ExonRegion 0 164.88 146.08 258.42 350.99 70.61 327.03 98.00 46 E12a_E13a KnownJunction 0 171.79 148.78 285.98 332.68 65.33 337.03 88.02 47 ER13a ExonRegion 0 185.44 151.67 300.48 385.35 89.34 383.08 121.46 48 E13a_E14a KnownJunction 0 288.64 168.48 377.38 383.15 85.25 403.23 136.33 49 ER14a ExonRegion 0 183.87 139.50 276.19 332.77 60.78 362.37 114.17 50 E14a_E15a KnownJunction 0 308.78 151.53 381.81 385.78 105.21 471.09 166.98 51 ER15a ExonRegion 0 236.86 154.35 341.11 327.14 94.85 406.09 130.63 52 E15a_E16a KnownJunction 0 212.05 163.07 280.24 329.40 56.83 390.37 95.35 53 ER16a ExonRegion 0 261.28 165.67 336.24 368.45 68.65 381.30 109.93 54 E16a_E17a KnownJunction 0 273.88 105.98 355.15 308.30 64.80 301.20 118.58 55 ER17a ExonRegion 0 149.35 92.75 199.36 217.71 42.27 206.97 73.14 56 E17a_E18a KnownJunction 0 153.58 87.27 297.41 268.80 72.85 238.09 92.68 57 ER18a ExonRegion 0 153.39 99.40 252.29 246.72 47.94 238.11 90.75 58 E18a_E19a KnownJunction 0 139.01 92.87 191.51 203.07 35.13 222.81 73.23 59 ER19a ExonRegion 0 124.69 129.66 209.80 304.74 48.10 293.64 78.30 60 E19a_E20a KnownJunction 0 132.95 124.16 200.12 331.81 73.45 293.16 87.54 61 ER20a ExonRegion 0 119.64 148.48 182.56 390.49 68.26 321.79 100.77 62 E20a_E21a KnownJunction 0 102.36 147.28 132.15 374.62 55.79 280.65 95.42 63 E20a_E22a NovelJunction 0 0.77 2.39 2.31 11.68 2.31 13.75 0.00 64 ER21a ExonRegion 0 78.83 141.29 116.12 329.73 54.71 269.56 101.65 65 E21a_E22a KnownJunction 0 73.39 139.34 135.41 287.06 78.54 220.59 89.70 66 ER22a ExonRegion 0 156.31 124.28 181.36 335.45 75.54 269.18 93.88 67 E22a_E23a KnownJunction 0 233.79 130.62 225.37 354.84 77.04 323.66 100.23 68 ER23a ExonRegion 0 181.26 183.32 224.69 382.41 65.35 370.27 103.96 69 E23a_E24a KnownJunction 0 297.85 196.88 300.23 431.94 114.50 448.49 116.11 70 ER24a ExonRegion 0 179.41 170.23 231.50 357.63 69.74 379.87 95.87 71 E24a_E25a KnownJunction 0 124.12 150.06 179.43 315.15 65.12 357.88 86.71 72 ER25a ExonRegion 0 115.33 169.00 198.76 352.32 57.89 448.10 109.60 73 E25a_E26a KnownJunction 0 73.55 121.01 100.91 244.66 44.47 275.13 64.92 74 ER26a ExonRegion 0 134.33 158.88 226.87 366.49 66.88 459.36 107.41 75 E26a_E27a KnownJunction 0 152.85 136.87 274.80 365.43 105.65 464.82 108.32 76 ER27a ExonRegion 0 124.52 133.95 192.21 320.28 53.35 360.87 79.56 77 E27a_E28a KnownJunction 0 134.79 122.06 170.60 267.63 40.87 333.82 67.23 78 ER28a ExonRegion 0 137.68 86.65 187.23 214.25 47.23 292.52 73.82 79 E28_Da KnownBoundary 0 71.15 5.86 57.08 30.59 23.70 50.62 20.12 80 ER28b ExonRegion 1 60.49 34.82 76.88 90.86 18.42 183.30 21.50